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Answer: Guitar R package requires update due to dependency GenomicFeatures
by
Kevin Blighe
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4.0k
Greetings,
This issue is indeed caused by recent changes in the Bioconductor 3.20+ release cycle. The function makeTxDbFromGFF() was previ…
Answer: ATACseq rudimentary questions
by
Kevin Blighe
★
4.0k
For differential analysis tools like DiffTF and TOBIAS, the standard and statistically sound approach is to create **one large consensus pe…
Answer: Clarification on counting in Rsubread (featureCounts)
by
Kevin Blighe
★
4.0k
Dear Luca,
This is a very plausible behavior caused by **read assignment ambiguity** due to **overlapping gene coordinates** (specifical…
Answer: How to install packages such as TCGAbiolinks, SumarizedExperiment?
by
Gordon Smyth
53k
The warning message is telling you that you already have the packages installed.
However, you might consider upgrading to the current vers…
Comment: Guitar R package requires update due to dependency GenomicFeatures
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Frank
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Created by French developer Julien "Orteil" Thiennot, Cookie Clicker transformed the gaming landscape by introducing a new genre of idle ga…
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