Bioconductor Gsca

Showing : gsca • reset

0

votes

2

replies

986

views

HTSanalyzeR GSCA HTSanalyzeR GSCA

updated 11.9 years ago by Xin Wang ▴ 10 • written 11.9 years ago by Dario Strbenac ★ 1.5k

0

votes

0

replies

978

views

Microarray Clustering genefilter GSCA Microarray Clustering genefilter GSCA

12.1 years ago Thorsten Forster ▴ 10

4

votes

3

replies

1.3k

views

Microarray GSCA Microarray GSCA

updated 12.1 years ago by Naomi Altman ★ 6.0k • written 12.1 years ago by January Weiner ▴ 240

3 results • Page 1 of 1

Recent ...

Replies

Comment: Effect of lfcThreshold on p-value in DESeq2 by camillab. ▴ 10

great so the best approach would be using the lfcThreshold parameter to make sure that both p.value and log2fc are taken into account in t…

Comment: HTSeqGenie runs very slow by zh9118 • 0

I found that it's always the last chunk that took time forever, even though the last chunk is the smallest one. ![enter image description …

Answer: Error MakeOrgPackagefromNCBI by James W. MacDonald 63k

You will rarely find a particular strain in any annotation data, and instead you should use the 'main' taxon ID, which for *A. baumannii* h…

Comment: Setting up a multi-factor experiement by john.briseno • 0

thanks, will do! we work with a non-model organism, but perhaps the folks who do our genomics/sequencing have some input.

Comment: Mixed up sample info with plotPCA by Michael Love 40k

Just as a note, if the sample info table had been named (that is `rownames(sampleInfo)` not `NULL`, DESeq2 would have been able to detect t…

Votes

A: Effect of lfcThreshold on p-value in DESeq2

Comment: Mixed up sample info with plotPCA

Answer: Setting up a multi-factor experiement

Answer: Mouse to Human Genes using bioconductor

Mouse to Human Genes using bioconductor

Awards • All