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phenotest
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Bug in 'gsea' function ('phenoTest' package)
phenoTest
6.7 years ago
Damien Croteau-Chonka
▴ 10
0
votes
1
reply
1.2k
views
cox PH model - KM curve
Survival
phenoTest
Survival
phenoTest
updated 12.9 years ago by
Heidi Dvinge
★ 2.0k • written 12.9 years ago by
Adrian Johnson
▴ 330
0
votes
2
replies
1.1k
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phenoTest and variable-wise multiple testing
phenoTest
phenoTest
updated 11.3 years ago by
James W. MacDonald
65k • written 11.3 years ago by
Jon Manning
▴ 90
0
votes
0
replies
204
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R/sql code to find the haplotype data from patient's rsIDs
starallele
phenoTest
updated 6 months ago by
James W. MacDonald
65k • written 6 months ago by
greeshmathulasi1
• 0
0
votes
0
replies
1.5k
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[phenoTest package]: gsea.kegg error with absVals parameter
Pathways
GO
hgu133a
hgu95av2
phenoTest
Pathways
GO
hgu133a
hgu95av2
phenoTest
10.1 years ago
Kostas Kerkentzes
▴ 10
5 results • Page
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Comment: ChAMP installation issue
by
e1271094
• 0
I discovered that the dataset data("probe.features.epicv1") is unavailable. Instead, the dataset data("probe.features.epic") is accessible.…
Comment: ChAMP installation issue
by
e1271094
• 0
I apologise for any inconvenience. I have successfully installed the ChAMP package. However, I am now encountering a new error: myLoad <- …
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
Yes, blockLength=200000, and seg=seg. I am concerned about the inter-feature distance of features. I generated this plot for various bloc…
Answer: Can I trust the differential expression analysis when the two groups overlap on
by
Michael Love
42k
Can you use `vst` instead of `rlog` and increase to 1000 or 2000 genes? I'm wondering if there's a way to characterize these 7 samples. …
Comment: Can I trust the differential expression analysis when the two groups overlap on
by
BioinfGuru
▴ 30
I think I am about to run into the same issue with my data, so I'll be interested to read peoples opinions on this also i.e. when the group…
Votes
Answer: Error EPICv2 ChAMP
Comment: Store output of matchPWM()
Answer: Store output of matchPWM()
Answer: Store output of matchPWM()
Answer: ChipQC 'names' attribute [9] must be the same length as the vector [2]'
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