updated 14 months ago by
jtremblay514
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written 6.5 years ago by
chandu.ncbs
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Comment: ChAMP.DMR error - Error in makeGenomicRatioSetFromMatrix
by
O'Brien
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Consult the ChAMP.DMR documentation for more information on supported array types and expected data formats: https://bioconductor.org/packa…
Answer: combining raw counts and estimated counts
by
O'Brien
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It is possible to combine raw counts from TCGA and estimated counts from GEO datasets (Kalisto pseudoalignment) while mitigating batch effe…
Comment: Packages don't update, but no error or warning is thrown
by
neighsanlo
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This is useful information.
Comment: Perform gene set enrichment analysis using fgsea on two conditions that don't ha
by
freemanmclaughlin9969289
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Tools such as Pathway Analysis with Deweighting of Overlapping Genes ([block blast][1]) or Gene Set Enrichment Analysis for Single Cell RNA…
Comment: How to get around the warning message: mzR has been built against a different Rc
by
Nan
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Hello, I was wondering if you were able to resolve this issue? I've recently encountered a similar problem and would like to ask for your a…
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