updated 7.7 years ago by
James W. MacDonald
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Answer: DESeq Input from Salmon + tximport/tximeta
by
Michael Love
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Given nf-core's pipeline here, you can use rounded counts from `gene_counts_length_scaled.tsv`.
Comment: Consistent Decimals In Data After Antibody Array Background Correction Using Lim
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josephjohnsonlo
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[Fight Club Red Leather Coat][1]
[1]: https://www.leather-outwears.com/product/fight-club-tyler-durden-red-leather-jacket
Comment: Question about using LRT test for time course experiments with DESeq2
by
James W. MacDonald
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You don't want to add a logFC on top like that, as it invalidates the p-value.
Maybe I wasn't clear before. The LRT gives you all the gene…
Comment: Question about using LRT test for time course experiments with DESeq2
by
Denise
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Hi James,
Thank you very much for your very detailed explanation!
I guess my question is simpler than that, I just want to union, across…
Answer: featureCounts segmentation fault with large chromosomes
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vkkodali
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Thanks to @yangliao this issue is fixed in subread v2.0.8
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