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Comment: Ideal approach to adjust for covariates for WGCNA by loarchales88 • 0
You have chosen power = 12, which seems high. Ideally, you would use the scale-free topology criterion to select an appropriate soft-thresh…
Comment: [DESeq2] time series strain-specific differences over time by Michael Love 42k
Yes, this gives mut vs wt at minute 15 comparing to baseline.
Answer: Annotating DMRs by James W. MacDonald 67k
You could use `ChIPpeakAnno`, or `missMethyl`
Comment: [DESeq2] time series strain-specific differences over time by floriandeckert ▴ 30
Dear Michael, thank you very much! I think I do have a intuition of the problem. It is still correct to use the following to compare WT v…
Comment: ı cant install clusterprofiler on my Ubuntu 20.04.6 LTS by semra • 0
``` >BiocManager::install(version = "3.19", lib = "~/R/x86_64-pc-linux-gnu-library/4.4") 'getOption("repos")' replaces Bioconductor standar…
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Comment: [DESeq2] time series strain-specific differences over time
Comment: [DESeq2] time series strain-specific differences over time
C: [DESeq2] time series strain-specific differences over time
Comment: [DESeq2] time series strain-specific differences over time
Comment: [DESeq2] time series strain-specific differences over time
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