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sigpathway
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master gene list for pathway analysis
pathway analysis
sigpathway
Genesets_EntrezGeneIDs.RData
5.5 years ago
maria
• 0
0
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4
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2.8k
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PANTHER in R.... Gene lists in sigPathway?
sigPathway
sigPathway
11.9 years ago
Voke AO
▴ 760
0
votes
2
replies
1.9k
views
help in downloading some packages.
goTools
sigPathway
topGO
goTools
sigPathway
topGO
updated 13.6 years ago by
Michael Dondrup
▴ 550 • written 13.6 years ago by
Veerendra GP
▴ 100
0
votes
0
replies
924
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computer out of memory when using sigpathway
Microarray
Annotation
sigPathway
Microarray
Annotation
sigPathway
13.9 years ago
山中程
▴ 10
0
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0
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808
views
sigpathway pheno object
sigPathway
sigPathway
14.8 years ago
Adrian Johnson
▴ 330
0
votes
0
replies
775
views
sigPathway on Agilent data
sigPathway
sigPathway
15.9 years ago
Srinivas Iyyer
▴ 600
0
votes
3
replies
881
views
How can I make genesets for sigpathway
sigPathway
sigPathway
updated 16.2 years ago by
James W. MacDonald
65k • written 16.2 years ago by
Srinivas Iyyer
▴ 600
7 results • Page
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Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
James W. MacDonald
65k
Are you commenting on the OP's question, or adding a different question? If the latter, please start a new post rather than piggybacking on…
Answer: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Use `bquote`. See section 4.6 in [the vignette][1]. [1]: https://bioconductor.org/packages/release/bioc/vignettes/EnhancedVolcano/in…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
SamGG
▴ 350
I was thinking about removing unwanted variations at the sample level (ie a transformation shared across genes) not at the gene level. Corr…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
James W. MacDonald
65k
That's an assumption used for normalization of a sample, not an assumption you can use for an individual model. We always normalize to atte…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
SamGG
▴ 350
Is useless the assumption that the majority of genes have no variation in expression (bearing in mind that they are distributed over the en…
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biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
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