Showing : singlecellsignalr • reset
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After having the output from SingleR for cell type annotation, what's the next step to assign the cell type to each cluster
SingleCellSignalR SingleCellWorkflow SingleR
updated 5 weeks ago by ★ 26k • written 5 weeks ago by • 0
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clustering(): Error in checkForRemoteErrors(val) : 3 nodes produced errors; first error: subscript out of bounds
SingleCellSignalR
4 months ago pucci • 0
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Comment: Strange error in bsseq when trying to assign seqinfo by jonescelinaa • 0
Ahh that is great thank you ! Good for special needs too ! [krunker][1] [1]: http://krunkeronline.com/
Comment: Unable to run "library(DESeq2)" successfully by jonescelinaa • 0
very useful information. Thank you for sharing! [friday night funkin][1] [1]: https://fridaynightfunkin.co
Comment: Binding matrix created by DiffBind by Rory Stark ★ 3.9k
Everything that is supposed to be there is there! The internal `$binding` matrix uses a type of factor representation of chromosome names, …
Comment: Data input for aracne2regulon function in viper package by Luna_P • 0
Thank you!
Comment: Data input for aracne2regulon function in viper package by Keith Hughitt ▴ 140
Hi, I'm afraid not, so I don't think I can be much help, unfortunately. In the past, the authors of ARACNe-AP were generally quite responsi…
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Answer: DESeq2 for allele-specific expression with contrasts between conditions
C: DESeq2 question about use of DESeqDataSetFromTximport() from RSEM data
Comment: Data input for aracne2regulon function in viper package
Comment: DESeq2: NA's in mcols(object)$betaConv
Answer: Using tximeta::summarizeToGene function; Warning message: call dbDisconnect() w
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