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synapter
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installing synapter package: package is not available for Bioconductor version '3.14'
synapter
Install
2.2 years ago
czan
▴ 10
4
votes
15
replies
3.1k
views
Converting Synapter object output into a MSnbase-compatible object
synapter
msnbase
8.7 years ago • updated 8.6 years ago
diana.schreier
• 0
1
vote
5
replies
1.5k
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Load data in Synapter
synergise
synapter
updated 9.4 years ago by
Sebastian Gibb
▴ 80 • written 9.4 years ago by
sogueta
• 0
2
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12
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2.3k
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Synapter - makeMaster() and synergise() functions warnings/fails
software error
warnings
synapter
9.4 years ago
sogueta
• 0
4 results • Page
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Comment: fgsea significant result
by
Chris
• 0
Thanks ATpoint! Setting a fixed seed can reproduce the same result. However, if someone else analyze the same data with different seed, the…
Comment: SGSeq: moving toward diffex from SGSeq analysis
by
Sara
• 0
Thank you for your response. I have another question about saving the sgvc result as a CSV file. I would appreciate your help, please. ``` …
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
I tried different block lengths first and considered 100000 to be ideal because of the almost similar inter-range distance. S1= bootRange…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
The segmentation and block length are key parameters. We recommend for example blocks of length ~500kb. It would help if you would post yo…
Answer: Handling multiple differential expression comparisons
by
Michael Love
41k
It's typical that results are presented with each group having its own FDR control. So presenting each comparison with the adjusted p-va…
Votes
Handling multiple differential expression comparisons
Answer: fgsea significant result
Answer: fgsea significant result
package goseq seems to be not available on the latest version of R
package goseq seems to be not available on the latest version of R
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