Bioconductor Tcc

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DifferentialExpression Normalization Cancer edgeR baySeq DESeq EBSeq TCC Normalization

updated 10.9 years ago by Koji Kadota ▴ 10 • written 10.9 years ago by Gordon Smyth 52k

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DifferentialExpression Normalization Cancer edgeR baySeq DESeq EBSeq TCC Normalization

updated 10.9 years ago by Jianqiang SUN ▴ 10 • written 10.9 years ago by Pankaj Agarwal ▴ 100

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RNASeq TCC RNASeq TCC

updated 11.6 years ago by Ryan C. Thompson ★ 7.9k • written 11.6 years ago by Guest User ★ 13k

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PROcess Rsamtools Rsubread TCC PROcess Rsamtools Rsubread TCC

13.1 years ago Thomas Girke ★ 1.7k

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Comment: Bioconductor unable to update 'curl' by kagodwi2 • 0

Thank you for the advice. As requested: ``` [1] "C:/Users/kenda/AppData/Local/R/win-library/4.4" [2] "C:/Program Files/R/R-4.4.3/library" …

Comment: Bioconductor unable to update 'curl' by shepherl 4.1k

what is the result of `.libPaths()` It could be that curl was installed with an admin account or in a different location that would need t…

Comment: Ensembl site unresponsive via biomaRt by Mike Smith ★ 6.6k

Can you try updating the **curl** package to the latest version. The `curl_parse_url()` function was only added in version 6.0 and you're …

Answer: best way to grouping GSM belonging to different datasets (with different platfor by James W. MacDonald 68k

The only defensible way is to make comparisons within experiments and then do a meta-analysis. But that assumes you have identified multipl…

Comment: DESeq2 estimateSizeFactors with control genes by sofia.rigou • 0

I am also trying to use this function to estimate sizefactor based on RT-dPCR data but estimateSizeFactor only takes integers. Should I mul…

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Answer: Is there any chance to solve "the model matrix is not full rank" in DESeq2?

clusterProfiler-GO enrichment Error

A: Machine learning in R book

Data preparation and Machine learning on time course RNAseq data

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