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Comment: Does DiffBind make consensus peaks sets for samples from a given condition (e.g.
by
tahir.msajid
•
0
Got it. Thank you Rory.
Comment: RUVSeq and DESeq2 -- all variables in design formula must be columns in colData
by
garbuzov
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0
Thanks! That was it... why did I think they were equivalent?
Comment: Time-course, comparison of two groups
by
boczniak767
▴
720
Thank you @gordon-smyth for your patience and time. I see that I need to reread carefully the user guide so I could follow your advice.
Comment: Time-course, comparison of two groups
by
boczniak767
▴
720
> Do you have actually have data or is this is a theoretical exercise?
A the moment I don't have data from my principal investigator's exp…
Comment: Time-course, comparison of two groups
by
Gordon Smyth
47k
> Are there differences between treatment (cold vs regrowth) time profiles for each line?
To answer that question, you test for interactio…
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