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tximeta
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262
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Which fasta files to use for tximeta makeLinkTxome
tximeta
DESeq2
3 months ago
JING
• 0
0
votes
1
reply
605
views
tximeta errors: couldn't find matching transcriptome, returning non-ranged SummarizedExperiment AND unable to find an inherited method for function '…
tximeta
updated 5 months ago by
Michael Love
41k • written 5 months ago by
kyliecode
• 0
1
vote
2
replies
552
views
AnnotationHub data for Mus musculus seems to be missing, while previously it was there
tximeta
AnnotationHub
AnnotationHubData
6 months ago
Thon
• 0
1
vote
2
replies
528
views
tximeta error with vroom
tximeta
vroom
6 months ago
Pufall, Miles A
▴ 30
0
votes
4
replies
739
views
Tximeta error in analysis of downloaded data
tximeta
12 months ago
真妃
• 0
1
vote
3
replies
788
views
collapseReplicates error after tximeta
fishpond
tximeta
DESeq2
updated 7 months ago by
Michael Love
41k • written 14 months ago by
Rihards Saksis
• 0
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Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh LOL. My markdown got edited by the markdown editor! What is between the p and 50 in the first case is the HTML for greater than or equal…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Ah, good point. You could instead try ``` > library(ggtext) > keyvals.shape = c(rep(3,10), rep(2,8)) > names(keyvals.shape) = ifelse(keyva…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
pl23
• 0
Hi, Yes, I've tried this, but I am not sure if it is possible to assign `bquote` values to the names of a vector. In particular, if I use…
Votes
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
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