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Comment: bootstrapNullAlternativeModel() returns error
by
Tobias
▴
30
The input data to the function looks like:
```
> preproc_df
# A tibble: 314,317 × 16
representative `Total Peptides` `Total Spectral Co…
Comment: Error "DESeqDataSetFromMatrix" function not found
by
Basti
▴
330
Do you have any error when you run `library(DESeq2)` or `BiocManager::install("DESeq2")` ?
Answer: Compare different cell lines with tissues using limma
by
Gordon Smyth
45k
You just need to define contrasts corresponding to the comparisons you want to make. Just define
```
design <- model.matrix(~0+cellType)
c…
Comment: What is the significance of "Zero Cross" in Ranked List Metric in Gene Set Enric
by
Bhavana
•
0
Thank you so much for your response, I will keep in mind regarding making posts about Bioconductor packages! :)
Comment: Function simplify fails when argument ont is set to "ALL" in enrichGO function i
by
pengmin.wang.1
•
0
sorry, I post my question here, maybe not related to the topic. Now I'm doing enrichment using clusterprofiler and WebGestalR. Here, x <- u…
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