updated 7.8 years ago by
Gordon Smyth
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written 7.8 years ago by
svlachavas
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Answer: Compare and filter three BAM files
by
swbarnes2
★
1.2k
If you think you have a mix of three different organisms in the ix, the better way to do this is to make one reference with all three genom…
Comment: enrichKEGG results for non-model organism
by
Aciole.D
•
0
If anyone still wondering about this:
You can filter your 'kegg' object based on a list of target pathways.
Look at these fields:
`kegg@…
Comment: KEGG enrichment in R and gene IDs
by
Laia
▴
10
I could finally solve this and I could get KEGG results :)
Thank you so much for your help and quick replies.
Best,
Laia
Comment: KEGG enrichment in R and gene IDs
by
James W. MacDonald
62k
This part is the main issue.
```
‘GOSemSim’ 2.22.0 is already loaded, but >= 2.23.1 is required
```
You should restart R and then re-insta…
Comment: Correct script for featurecounts in Rsubread
by
rmoorehe
•
0
Thanks for the help. I was able to work through it using the bioconductor link. For some reason, I thought I had to create a new tab delimi…
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