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Comment: ComplexHeatmap - Heatmap function within a for loop
by
jokergoo
▴
150
What is `hm_list`? I would not use `ggsave()` to save the heatmaps. Can you directly use:
```
pdf(...)
draw(ht). # or print(ht)
dev.off()
…
Comment: Error message: Could not find function "DESeqDataSetFromMatrix"
by
Md. Faridul
•
0
After run the library(DESeq2).
Error: package or namespace load failed for ‘DESeq2’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()),…
Comment: Why Negative value from GSVA
by
Yang Shi
•
0
Thanks for your detailed reply sir! Sorry for the typo 'Row'. Actually, the raw count data is from TCGA database (STAR - Count). The Log2(F…
Comment: ComplexHeatmap - Heatmap function within a for loop
by
krushnach80
•
0
I'm trying to save list of heatmaps after doing this
hm_lst<-cmplx_ht(list_of_files,metadata)
The to save I tried something like thi…
Answer: calculateQCMetrics defunct, how to calculate the quality metrics by perCellQCMet
by
James W. MacDonald
60k
When a function is deprecated, that usually doesn't mean that the author/maintainer just changed the name of a function. That's always poss…
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