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Comment: C: sva ComBat implementation for multiple sources of batch effects
5.6 years ago Zach Roe ▴ 10
7
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6
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3.1k
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sva ComBat implementation for multiple sources of batch effects
sva combat batch-adjustment
updated 5.6 years ago by ▴ 870 • written 5.6 years ago by ▴ 10
0
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1
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3.1k
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Comment: C: sva ComBat implementation for multiple sources of batch effects
5.6 years ago Zach Roe ▴ 10
0
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1
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2.1k
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Comment: C: DESeq2 rlog blinding if calculating variance of expression?
5.6 years ago Zach Roe ▴ 10
0
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1
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2.1k
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Comment: C: DESeq2 rlog blinding if calculating variance of expression?
5.6 years ago Zach Roe ▴ 10
0
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1
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2.1k
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Comment: C: DESeq2 rlog blinding if calculating variance of expression?
5.6 years ago Zach Roe ▴ 10
8
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8
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2.1k
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DESeq2 rlog blinding if calculating variance of expression?
deseq2 rlog
5.6 years ago Zach Roe ▴ 10
0
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0
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2.4k
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Comment: C: Genomic Ranges: Convert from 0-base to 1-base
5.6 years ago Zach Roe ▴ 10
2
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2
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2.4k
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Genomic Ranges: Convert from 0-base to 1-base
GenomicRanges
updated 5.7 years ago by ★ 11k • written 5.7 years ago by ▴ 10
2
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1
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1.5k
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lumi: Importing Methylation EPIC IDAT files
lumi EPIC Methylation
5.7 years ago Zach Roe ▴ 10
0
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0
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3.4k
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Comment: C: DESeq2: Difference in rlog and vst values if run transform before or after runni
8.8 years ago Zach Roe ▴ 10
2
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2
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3.4k
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DESeq2: Difference in rlog and vst values if run transform before or after running DESeq
deseq2 rlog variancestabilizingtransformation DESeq
updated 8.8 years ago by 43k • written 8.8 years ago by ▴ 10
0
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0
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1.9k
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Comment: C: dendextend: color_branches not working for certain hclust methods
8.8 years ago Zach Roe ▴ 10
0
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1
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1.9k
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dendextend: color_branches not working for certain hclust methods
dendextend
8.8 years ago Zach Roe ▴ 10
0
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1
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8.4k
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Comment: C: DESeq2: Applying different pre-filtering for DE and EDA/Visualization of RNASeq
8.8 years ago Zach Roe ▴ 10
0
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0
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1.3k
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Answer: A: NA's returned for GEO GPL3921 platform probsets
8.9 years ago • updated 8.8 years ago Zach Roe ▴ 10
0
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0
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8.8k
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Comment: C: DESeq2 cooksCutoff ON/OFF: pairwise contrasts for many groups, some with only 2
8.8 years ago Zach Roe ▴ 10
0
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1
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8.8k
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Comment: C: DESeq2 cooksCutoff ON/OFF: pairwise contrasts for many groups, some with only 2
8.9 years ago Zach Roe ▴ 10
0
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1
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8.4k
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Comment: C: DESeq2: Applying different pre-filtering for DE and EDA/Visualization of RNASeq
8.9 years ago Zach Roe ▴ 10
0
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1
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8.4k
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Comment: C: DESeq2: Applying different pre-filtering for DE and EDA/Visualization of RNASeq
8.9 years ago Zach Roe ▴ 10
5
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8
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8.4k
views
DESeq2: Applying different pre-filtering for DE and EDA/Visualization of RNASeq data
deseq2 pre-filtering
updated 8.9 years ago by 43k • written 8.9 years ago by ▴ 10
3
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4
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8.8k
views
DESeq2 cooksCutoff ON/OFF: pairwise contrasts for many groups, some with only 2 reps
deseq2 cookscutoff
updated 8.9 years ago by 43k • written 8.9 years ago by ▴ 10
1
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1
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1.3k
views
NA's returned for GEO GPL3921 platform probsets
geoquery
9.3 years ago • updated 8.9 years ago Zach Roe ▴ 10
2
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1
reply
2.5k
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Missing SYMBOL keytype in EnsDb.Hsapiens.v75
annotationdbi EnsDb.Hsapiens.v75
updated 9.4 years ago by ★ 2.1k • written 9.4 years ago by ▴ 10
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