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Comment:
C: sva ComBat implementation for multiple sources of batch effects
4.0 years ago
Zach Roe
▴ 10
7
votes
6
replies
1.6k
views
sva ComBat implementation for multiple sources of batch effects
sva
combat
batch-adjustment
updated 4.0 years ago by
W. Evan Johnson
▴ 850 • written 4.0 years ago by
Zach Roe
▴ 10
0
votes
1
reply
1.6k
views
Comment:
C: sva ComBat implementation for multiple sources of batch effects
4.0 years ago
Zach Roe
▴ 10
0
votes
1
reply
1.2k
views
Comment:
C: DESeq2 rlog blinding if calculating variance of expression?
4.0 years ago
Zach Roe
▴ 10
0
votes
1
reply
1.2k
views
Comment:
C: DESeq2 rlog blinding if calculating variance of expression?
4.0 years ago
Zach Roe
▴ 10
0
votes
1
reply
1.2k
views
Comment:
C: DESeq2 rlog blinding if calculating variance of expression?
4.0 years ago
Zach Roe
▴ 10
8
votes
8
replies
1.2k
views
DESeq2 rlog blinding if calculating variance of expression?
deseq2
rlog
4.0 years ago
Zach Roe
▴ 10
0
votes
0
replies
1.5k
views
Comment:
C: Genomic Ranges: Convert from 0-base to 1-base
4.0 years ago
Zach Roe
▴ 10
2
votes
2
replies
1.5k
views
Genomic Ranges: Convert from 0-base to 1-base
GenomicRanges
updated 4.0 years ago by
Michael Lawrence
★ 11k • written 4.0 years ago by
Zach Roe
▴ 10
2
votes
1
reply
977
views
lumi: Importing Methylation EPIC IDAT files
lumi
EPIC
Methylation
4.0 years ago
Zach Roe
▴ 10
0
votes
0
replies
2.6k
views
Comment:
C: DESeq2: Difference in rlog and vst values if run transform before or after runni
7.1 years ago
Zach Roe
▴ 10
2
votes
2
replies
2.6k
views
DESeq2: Difference in rlog and vst values if run transform before or after running DESeq
deseq2
rlog
variancestabilizingtransformation
DESeq
updated 7.2 years ago by
Michael Love
41k • written 7.2 years ago by
Zach Roe
▴ 10
0
votes
0
replies
1.4k
views
Comment:
C: dendextend: color_branches not working for certain hclust methods
7.2 years ago
Zach Roe
▴ 10
0
votes
1
reply
1.4k
views
dendextend: color_branches not working for certain hclust methods
dendextend
7.2 years ago
Zach Roe
▴ 10
0
votes
1
reply
6.7k
views
Comment:
C: DESeq2: Applying different pre-filtering for DE and EDA/Visualization of RNASeq
7.2 years ago
Zach Roe
▴ 10
0
votes
0
replies
953
views
Answer:
A: NA's returned for GEO GPL3921 platform probsets
7.2 years ago
Zach Roe
▴ 10
0
votes
0
replies
6.7k
views
Comment:
C: DESeq2 cooksCutoff ON/OFF: pairwise contrasts for many groups, some with only 2
7.2 years ago
Zach Roe
▴ 10
0
votes
1
reply
6.7k
views
Comment:
C: DESeq2 cooksCutoff ON/OFF: pairwise contrasts for many groups, some with only 2
7.2 years ago
Zach Roe
▴ 10
0
votes
1
reply
6.7k
views
Comment:
C: DESeq2: Applying different pre-filtering for DE and EDA/Visualization of RNASeq
7.2 years ago
Zach Roe
▴ 10
0
votes
1
reply
6.7k
views
Comment:
C: DESeq2: Applying different pre-filtering for DE and EDA/Visualization of RNASeq
7.2 years ago
Zach Roe
▴ 10
5
votes
8
replies
6.7k
views
DESeq2: Applying different pre-filtering for DE and EDA/Visualization of RNASeq data
deseq2
pre-filtering
updated 7.2 years ago by
Michael Love
41k • written 7.2 years ago by
Zach Roe
▴ 10
3
votes
4
replies
6.7k
views
DESeq2 cooksCutoff ON/OFF: pairwise contrasts for many groups, some with only 2 reps
deseq2
cookscutoff
updated 7.2 years ago by
Michael Love
41k • written 7.2 years ago by
Zach Roe
▴ 10
1
vote
1
reply
953
views
NA's returned for GEO GPL3921 platform probsets
geoquery
7.7 years ago • updated 7.2 years ago
Zach Roe
▴ 10
2
votes
1
reply
1.8k
views
Missing SYMBOL keytype in EnsDb.Hsapiens.v75
annotationdbi
EnsDb.Hsapiens.v75
updated 7.7 years ago by
Johannes Rainer
★ 2.0k • written 7.7 years ago by
Zach Roe
▴ 10
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