Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
1.2k
views
Comment: Comment: Error loading package MSnbase on MacOS
22 months ago ATpoint ★ 4.4k
0
votes
0
replies
3.4k
views
Comment: Comment: Error with DESeq2: DESeqDataSet(se, design = design, ignoreRank) : counts ma
22 months ago ATpoint ★ 4.4k
0
votes
0
replies
1.1k
views
Answer: Answer: Trouble with importing transcript counts with Salmon
22 months ago ATpoint ★ 4.4k
0
votes
1
reply
3.4k
views
Comment: Comment: Error with DESeq2: DESeqDataSet(se, design = design, ignoreRank) : counts ma
22 months ago ATpoint ★ 4.4k
0
votes
1
reply
3.4k
views
Answer: Answer: Error with DESeq2: DESeqDataSet(se, design = design, ignoreRank) : counts ma
22 months ago ATpoint ★ 4.4k
1
vote
0
replies
891
views
Comment: Comment: SingleR using TPM in a bulk RNA seq dataset
22 months ago ATpoint ★ 4.4k
2
votes
1
reply
8.2k
views
Comment: Comment: Install DESeq2 problem for macbook pro M1 Max
22 months ago ATpoint ★ 4.4k
1
vote
1
reply
1.7k
views
Comment: Comment: why there are read counts in the gene knock out rat RNA-seq data
23 months ago ATpoint ★ 4.4k
0
votes
1
reply
1.9k
views
Comment: Comment: How to extract all comparison in DESeq2 LRT test
23 months ago ATpoint ★ 4.4k
0
votes
1
reply
1.9k
views
Comment: Comment: How to extract all comparison in DESeq2 LRT test
23 months ago ATpoint ★ 4.4k
0
votes
0
replies
866
views
Answer: Answer: Limit the number of nodes in DESeq2
23 months ago ATpoint ★ 4.4k
0
votes
0
replies
1.6k
views
Comment: Comment: HOMER error: Where is the file?
23 months ago ATpoint ★ 4.4k
0
votes
1
reply
751
views
Comment: Comment: limma manual typo
23 months ago ATpoint ★ 4.4k
0
votes
1
reply
1.6k
views
Answer: Answer: Differential Expression Analysis on RNAseq - RSEM expected_count from UCSC RNA-S
23 months ago ATpoint ★ 4.4k
1
vote
0
replies
2.7k
views
Comment: Comment: t.test to determine the P-value in DESeq2
23 months ago ATpoint ★ 4.4k
1
vote
0
replies
820
views
Answer: Answer: What should I do with RNA-Seq data to get a gene that work?
23 months ago ATpoint ★ 4.4k
0
votes
1
reply
2.7k
views
Comment: Comment: t.test to determine the P-value in DESeq2
23 months ago ATpoint ★ 4.4k
0
votes
1
reply
820
views
Comment: Comment: What should I do with RNA-Seq data to get a gene that work?
23 months ago ATpoint ★ 4.4k
1
vote
0
replies
1.1k
views
Comment: Comment: Design formula with batch effects DESeq2 "Not full rank matrix" error.
23 months ago ATpoint ★ 4.4k
2
votes
0
replies
620
views
Answer: Answer: Should I set a seed prior to running AUCell?
23 months ago ATpoint ★ 4.4k
0
votes
1
reply
2.7k
views
Comment: Comment: t.test to determine the P-value in DESeq2
23 months ago ATpoint ★ 4.4k
2
votes
1
reply
2.7k
views
Answer: Answer: t.test to determine the P-value in DESeq2
23 months ago ATpoint ★ 4.4k
0
votes
0
replies
1.9k
views
Comment: Comment: Cannot install bioconductor DESeq2 package on M1 mac ... any advice?
23 months ago ATpoint ★ 4.4k
0
votes
1
reply
1.9k
views
Answer: Answer: Cannot install bioconductor DESeq2 package on M1 mac ... any advice?
23 months ago ATpoint ★ 4.4k
1
vote
0
replies
2.0k
views
Comment: Comment: Error in `.rowNamesDF<-`(x, value = value) : duplicate 'row.names' are not al
23 months ago ATpoint ★ 4.4k
2
votes
1
reply
1.6k
views
Answer: Answer: How to convert transcript counts to gene counts in R?
23 months ago ATpoint ★ 4.4k
0
votes
0
replies
810
views
Answer: Answer: DESeq2 - Differential expression for miRNA data
23 months ago ATpoint ★ 4.4k
2
votes
1
reply
944
views
Answer: Answer: featureCounts: No effect of setting -d and -D?
23 months ago ATpoint ★ 4.4k
3
votes
1
reply
1.2k
views
Answer: Answer: What is the correct way to import transcript abundances from 3' Quantseq results
23 months ago ATpoint ★ 4.4k
0
votes
1
reply
1.4k
views
Answer: Answer: Skew of differentially expressed genes using DESeq2
23 months ago ATpoint ★ 4.4k
0
votes
1
reply
1.1k
views
Comment: Comment: DESeq2 for ribo-IP analysis
23 months ago ATpoint ★ 4.4k
0
votes
1
reply
1.1k
views
Answer: Answer: DESeq2 for ribo-IP analysis
23 months ago ATpoint ★ 4.4k
0
votes
1
reply
932
views
Comment: Comment: multiple correction on mean of TPM
23 months ago ATpoint ★ 4.4k
1
vote
1
reply
1.1k
views
Answer: Answer: Combine scRNAseq data for bulk analysis using DESeq2
24 months ago ATpoint ★ 4.4k
1
vote
1
reply
1.5k
views
Comment: Comment: I have problems installing DESeq2 using R4.1.2. It tells me that it is not avail
24 months ago ATpoint ★ 4.4k
2
votes
0
replies
2.2k
views
Answer: Answer: Removing metadata rows containing NA values in GRanges
24 months ago ATpoint ★ 4.4k
0
votes
0
replies
2.5k
views
Answer: Answer: Properly constructing a hypergeometric test
24 months ago ATpoint ★ 4.4k
0
votes
0
replies
623
views
Answer: Answer: Extracting multi-design adjusted counts on DESeq2
24 months ago ATpoint ★ 4.4k
0
votes
0
replies
1.7k
views
Comment: Comment: merge TPM values for same geneID
2.0 years ago ATpoint ★ 4.4k
0
votes
1
reply
1.7k
views
Answer: Answer: merge TPM values for same geneID
2.0 years ago ATpoint ★ 4.4k
0
votes
1
reply
2.0k
views
Comment: Comment: No differentially expressed genes after DESeq
2.0 years ago ATpoint ★ 4.4k
1
vote
1
reply
1.3k
views
Comment: Comment: DESEQ2 several samples per individual
2.0 years ago ATpoint ★ 4.4k
1
vote
1
reply
1.3k
views
Answer: Answer: DESEQ2 several samples per individual
2.0 years ago ATpoint ★ 4.4k
0
votes
0
replies
436
views
Answer: Answer: Bioconductor Rpackages install
2.0 years ago ATpoint ★ 4.4k
1
vote
0
replies
1.6k
views
Comment: Comment: difference between txi$counts and txi$abundance when countsFromAbundance is true
2.0 years ago ATpoint ★ 4.4k
0
votes
0
replies
874
views
Comment: Comment: Confused about design for RNA seq experiment
2.0 years ago ATpoint ★ 4.4k
0
votes
0
replies
894
views
Answer: Answer: tcga expression data
2.0 years ago ATpoint ★ 4.4k
1
vote
0
replies
968
views
Answer: Answer: Gene abundance DESEq
2.0 years ago ATpoint ★ 4.4k
0
votes
0
replies
4.8k
views
Comment: Comment: BaseMean threshold
2.0 years ago ATpoint ★ 4.4k
0
votes
1
reply
4.8k
views
Comment: Comment: BaseMean threshold
2.0 years ago ATpoint ★ 4.4k
971 results • Page 12 of 20
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6