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Comment: C: Reading in delta Ct values using HTqPCR
6.8 years ago Nithisha ▴ 10
0
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0
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2.8k
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Comment: C: Performing differential gene analysis on RT PCR experimental data
6.8 years ago Nithisha ▴ 10
2
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2
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1.3k
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Reading in delta Ct values using HTqPCR
htqpcr
updated 6.9 years ago by 52k • written 6.9 years ago by ▴ 10
5
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5
replies
2.8k
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Performing differential gene analysis on RT PCR experimental data
differential gene expression
updated 6.9 years ago by 52k • written 6.9 years ago by ▴ 10
0
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0
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2.8k
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Comment: C: Performing differential gene analysis on RT PCR experimental data
6.9 years ago Nithisha ▴ 10
0
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0
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2.0k
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Comment: C: Best way to design a contrast matrix for analysis of dataset
6.9 years ago Nithisha ▴ 10
0
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1
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2.0k
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Comment: C: Best way to design a contrast matrix for analysis of dataset
6.9 years ago Nithisha ▴ 10
0
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1
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2.0k
views
Answer: A: Best way to design a contrast matrix for analysis of dataset
6.9 years ago Nithisha ▴ 10
3
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6
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2.0k
views
Best way to design a contrast matrix for analysis of dataset
Limma
6.9 years ago Nithisha ▴ 10
0
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0
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2.3k
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Comment: C: Standardizing gene symbols
7.1 years ago Nithisha ▴ 10
0
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0
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2.3k
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Comment: C: Standardizing gene symbols
7.1 years ago Nithisha ▴ 10
3
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6
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2.3k
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Standardizing gene symbols
R
updated 7.1 years ago by 52k • written 7.1 years ago by ▴ 10
0
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1
reply
1.4k
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Solve overlapping gene labels in volcano plot when using textxy
R
7.1 years ago Nithisha ▴ 10
1
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0
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2.3k
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Comment: C: Standardizing gene symbols
7.1 years ago Nithisha ▴ 10
0
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0
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7.8k
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Comment: C: Volcano Plot (highlighting top genes in a different color)
7.1 years ago Nithisha ▴ 10
2
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4
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7.8k
views
Volcano Plot (highlighting top genes in a different color)
volcanoplot
updated 7.1 years ago by ▴ 160 • written 7.1 years ago by ▴ 10
0
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0
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1.5k
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Comment: C: DEG with Limma without replicates and best plots to represent results
7.1 years ago Nithisha ▴ 10
0
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0
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8.9k
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Comment: C: Using R for EnrichR analysis
7.1 years ago Nithisha ▴ 10
0
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1
reply
1.5k
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Comment: C: DEG with Limma without replicates and best plots to represent results
7.1 years ago Nithisha ▴ 10
0
votes
1
reply
8.9k
views
Comment: C: Using R for EnrichR analysis
updated 7.1 years ago by 52k • written 7.1 years ago by ▴ 10
2
votes
4
replies
1.5k
views
DEG with Limma without replicates and best plots to represent results
Limma
updated 7.1 years ago by ★ 28k • written 7.1 years ago by ▴ 10
0
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0
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8.9k
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Comment: C: Using R for EnrichR analysis
7.1 years ago Nithisha ▴ 10
3
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6
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8.9k
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Using R for EnrichR analysis
Enrichr
updated 7.1 years ago by ▴ 160 • written 7.1 years ago by ▴ 10
0
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0
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2.3k
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Comment: C: limma topTable doesn't work without replicates [was: Help with limma]
7.1 years ago Nithisha ▴ 10
0
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0
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2.0k
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Comment: C: Downloading microarray data for DEG analysis!
7.1 years ago Nithisha ▴ 10
0
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0
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6.0k
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Comment: C: Best DEG tool for datasets with FPKM counts?
7.1 years ago Nithisha ▴ 10
0
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1
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6.0k
views
Answer: A: Best DEG tool for datasets with FPKM counts?
7.2 years ago Nithisha ▴ 10
4
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4
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6.0k
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Best DEG tool for datasets with FPKM counts?
FPKM
7.2 years ago Nithisha ▴ 10
0
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1
reply
2.0k
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Comment: C: Downloading microarray data for DEG analysis!
7.2 years ago Nithisha ▴ 10
0
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1
reply
2.0k
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Comment: C: Downloading microarray data for DEG analysis!
7.2 years ago Nithisha ▴ 10
0
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0
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2.0k
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Comment: C: Downloading microarray data for DEG analysis!
7.2 years ago Nithisha ▴ 10
4
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7
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2.0k
views
Downloading microarray data for DEG analysis!
affymetrix microarrays
updated 7.2 years ago by 67k • written 7.2 years ago by ▴ 10
0
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0
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1.0k
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Comment: C: Creating design and contrast matrices for DEG with Limma for 2 factors?
7.2 years ago Nithisha ▴ 10
0
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1
reply
1.0k
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Comment: C: Creating design and contrast matrices for DEG with Limma for 2 factors?
7.2 years ago Nithisha ▴ 10
2
votes
4
replies
1.0k
views
Creating design and contrast matrices for DEG with Limma for 2 factors?
Limma
updated 7.2 years ago by ★ 28k • written 7.2 years ago by ▴ 10
0
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0
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867
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Comment: C: Using DESeq2 for DEG.
7.2 years ago Nithisha ▴ 10
0
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1
reply
867
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Comment: C: Using DESeq2 for DEG.
7.2 years ago Nithisha ▴ 10
0
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4
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867
views
Using DESeq2 for DEG.
deseq2
updated 7.2 years ago by 43k • written 7.2 years ago by ▴ 10
0
votes
1
reply
590
views
Problems with using Limma for DEG
limma
updated 7.2 years ago by ★ 28k • written 7.2 years ago by ▴ 10
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