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Comment: C: Reading in delta Ct values using HTqPCR
6.2 years ago Nithisha ▴ 10
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0
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2.3k
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Comment: C: Performing differential gene analysis on RT PCR experimental data
6.2 years ago Nithisha ▴ 10
2
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2
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1.0k
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Reading in delta Ct values using HTqPCR
htqpcr
updated 6.2 years ago by 50k • written 6.2 years ago by ▴ 10
5
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5
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2.3k
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Performing differential gene analysis on RT PCR experimental data
differential gene expression
updated 6.2 years ago by 50k • written 6.2 years ago by ▴ 10
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0
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2.3k
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Comment: C: Performing differential gene analysis on RT PCR experimental data
6.2 years ago Nithisha ▴ 10
0
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0
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1.7k
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Comment: C: Best way to design a contrast matrix for analysis of dataset
6.2 years ago Nithisha ▴ 10
0
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1
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1.7k
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Comment: C: Best way to design a contrast matrix for analysis of dataset
6.2 years ago Nithisha ▴ 10
0
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1
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1.7k
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Answer: A: Best way to design a contrast matrix for analysis of dataset
6.2 years ago Nithisha ▴ 10
3
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6
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1.7k
views
Best way to design a contrast matrix for analysis of dataset
Limma
6.2 years ago Nithisha ▴ 10
0
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0
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1.9k
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Comment: C: Standardizing gene symbols
6.4 years ago Nithisha ▴ 10
0
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0
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1.9k
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Comment: C: Standardizing gene symbols
6.4 years ago Nithisha ▴ 10
3
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6
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1.9k
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Standardizing gene symbols
R
updated 6.4 years ago by 50k • written 6.4 years ago by ▴ 10
0
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1
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1.2k
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Solve overlapping gene labels in volcano plot when using textxy
R
6.4 years ago Nithisha ▴ 10
1
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0
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1.9k
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Comment: C: Standardizing gene symbols
6.4 years ago Nithisha ▴ 10
0
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0
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7.2k
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Comment: C: Volcano Plot (highlighting top genes in a different color)
6.5 years ago Nithisha ▴ 10
2
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4
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7.2k
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Volcano Plot (highlighting top genes in a different color)
volcanoplot
updated 6.5 years ago by ▴ 160 • written 6.5 years ago by ▴ 10
0
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0
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1.1k
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Comment: C: DEG with Limma without replicates and best plots to represent results
6.5 years ago Nithisha ▴ 10
0
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0
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7.8k
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Comment: C: Using R for EnrichR analysis
6.5 years ago Nithisha ▴ 10
0
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1
reply
1.1k
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Comment: C: DEG with Limma without replicates and best plots to represent results
6.5 years ago Nithisha ▴ 10
0
votes
1
reply
7.8k
views
Comment: C: Using R for EnrichR analysis
updated 6.5 years ago by 50k • written 6.5 years ago by ▴ 10
2
votes
4
replies
1.1k
views
DEG with Limma without replicates and best plots to represent results
Limma
updated 6.5 years ago by ★ 28k • written 6.5 years ago by ▴ 10
0
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0
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7.8k
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Comment: C: Using R for EnrichR analysis
6.5 years ago Nithisha ▴ 10
3
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6
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7.8k
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Using R for EnrichR analysis
Enrichr
updated 6.5 years ago by ▴ 160 • written 6.5 years ago by ▴ 10
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0
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2.1k
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Comment: C: limma topTable doesn't work without replicates [was: Help with limma]
6.5 years ago Nithisha ▴ 10
0
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0
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1.7k
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Comment: C: Downloading microarray data for DEG analysis!
6.5 years ago Nithisha ▴ 10
0
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0
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5.4k
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Comment: C: Best DEG tool for datasets with FPKM counts?
6.5 years ago Nithisha ▴ 10
4
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4
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5.4k
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Best DEG tool for datasets with FPKM counts?
FPKM
6.5 years ago Nithisha ▴ 10
0
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1
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5.4k
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Answer: A: Best DEG tool for datasets with FPKM counts?
6.5 years ago Nithisha ▴ 10
0
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1
reply
1.7k
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Comment: C: Downloading microarray data for DEG analysis!
6.5 years ago Nithisha ▴ 10
0
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1
reply
1.7k
views
Comment: C: Downloading microarray data for DEG analysis!
6.5 years ago Nithisha ▴ 10
0
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0
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1.7k
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Comment: C: Downloading microarray data for DEG analysis!
6.5 years ago Nithisha ▴ 10
4
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7
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1.7k
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Downloading microarray data for DEG analysis!
affymetrix microarrays
updated 6.5 years ago by 65k • written 6.5 years ago by ▴ 10
0
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0
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839
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Comment: C: Creating design and contrast matrices for DEG with Limma for 2 factors?
6.5 years ago Nithisha ▴ 10
0
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1
reply
839
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Comment: C: Creating design and contrast matrices for DEG with Limma for 2 factors?
6.5 years ago Nithisha ▴ 10
2
votes
4
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839
views
Creating design and contrast matrices for DEG with Limma for 2 factors?
Limma
updated 6.5 years ago by ★ 28k • written 6.5 years ago by ▴ 10
0
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0
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725
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Comment: C: Using DESeq2 for DEG.
6.5 years ago Nithisha ▴ 10
0
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1
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725
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Comment: C: Using DESeq2 for DEG.
6.5 years ago Nithisha ▴ 10
0
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4
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725
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Using DESeq2 for DEG.
deseq2
updated 6.5 years ago by 41k • written 6.5 years ago by ▴ 10
0
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1
reply
466
views
Problems with using Limma for DEG
limma
updated 6.5 years ago by ★ 28k • written 6.5 years ago by ▴ 10
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