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Showing :
questions
0
votes
2
replies
714
views
can not retrieve the version of the package that is shown n R CMD daily checks
PADOG
git
3.4 years ago
Tarca, Adi
▴ 570
1
vote
4
replies
1.5k
views
summarizeOverlaps error with hg38
summarizeOverlaps
updated 8.3 years ago by
Hervé Pagès
16k • written 8.3 years ago by
Tarca, Adi
▴ 570
1
vote
6
replies
4.6k
views
Making data visible in packages (no visible binding for global variable ...)
updated 9.4 years ago by
kmezhoud
▴ 10 • written 15.5 years ago by
Tarca, Adi
▴ 570
0
votes
1
reply
1.1k
views
Negative parameter error when using goseq
GO
goseq
GO
goseq
updated 11.2 years ago by
Nadia Davidson
▴ 310 • written 11.2 years ago by
Tarca, Adi
▴ 570
0
votes
0
replies
1.7k
views
SPIA algorithm organisms not included already in the SPIA package
Organism
SPIA
goseq
KEGGREST
Organism
SPIA
goseq
KEGGREST
11.2 years ago
Tarca, Adi
▴ 570
0
votes
0
replies
1.4k
views
changes in SPIA package: using updated KEGG pathway data
Organism
SPIA
Organism
SPIA
11.2 years ago
Tarca, Adi
▴ 570
0
votes
0
replies
1.2k
views
Bioconductor Digest, Vol 119, Issue 5: Overrepresentation pathway with KEGGPROFILE and SPIA
Pathways
SPIA
KEGGprofile
Pathways
SPIA
KEGGprofile
11.3 years ago
Tarca, Adi
▴ 570
0
votes
0
replies
764
views
error in dmrFinder of charm package when there is one sample per group
charm
charm
11.9 years ago
Tarca, Adi
▴ 570
0
votes
0
replies
875
views
charm package using MEDIP protocol
charm
charm
11.9 years ago
Tarca, Adi
▴ 570
0
votes
7
replies
1.9k
views
about reduce function in GenomicRanges
Alignment
Alignment
12.3 years ago
Tarca, Adi
▴ 570
0
votes
0
replies
1.4k
views
SPIA package
Pathways
Organism
SPIA
Pathways
Organism
SPIA
12.4 years ago
Tarca, Adi
▴ 570
0
votes
0
replies
1.1k
views
question for you on SPIA package
Pathways
Organism
SPIA
Pathways
Organism
SPIA
12.6 years ago
Tarca, Adi
▴ 570
0
votes
8
replies
2.2k
views
foreach, doMC, and GOstats problems
GO
GOstats
GO
GOstats
updated 13.1 years ago by
Dan Tenenbaum
★ 8.2k • written 13.1 years ago by
Tarca, Adi
▴ 570
0
votes
0
replies
993
views
Bioconductor Digest, Vol 94, Issue 10
Pathways
SPIA
Pathways
SPIA
13.4 years ago
Tarca, Adi
▴ 570
0
votes
0
replies
1.3k
views
Bioconductor Digest, Vol 93, Issue 26: How to create KEGG's pathway data for SPIA?
Organism
KEGGgraph
SPIA
Organism
KEGGgraph
SPIA
13.4 years ago
Tarca, Adi
▴ 570
0
votes
0
replies
1.4k
views
SPIA: inferring inhibited pathways from up-regulated genes?
Pathways
SPIA
Pathways
SPIA
14.4 years ago
Tarca, Adi
▴ 570
0
votes
0
replies
1.2k
views
SPIA, hacked to run with only selected pathways
SystemsBiology
Pathways
Cancer
SPIA
SystemsBiology
Pathways
Cancer
SPIA
14.4 years ago
Tarca, Adi
▴ 570
0
votes
2
replies
1.2k
views
GO.db and Gostats question
Annotation
GO
PROcess
GOstats
Annotation
GO
PROcess
GOstats
updated 14.7 years ago by
Marc Carlson
★ 7.2k • written 14.7 years ago by
Tarca, Adi
▴ 570
0
votes
0
replies
676
views
Machine Learning Applications in Bioinformatics and Computational Biology (ICMLA 2009)
14.9 years ago
Tarca, Adi
▴ 570
0
votes
2
replies
1.1k
views
Affy Exon arrays
affy
exonmap
affy
exonmap
updated 14.9 years ago by
cstrato
★ 3.9k • written 14.9 years ago by
Tarca, Adi
▴ 570
0
votes
0
replies
1.3k
views
FDR control in conditional Hypergeometric test
Annotation
GO
GOstats
Annotation
GO
GOstats
15.0 years ago
Tarca, Adi
▴ 570
0
votes
2
replies
3.2k
views
limma contrasts with multiple groups
limma
limma
updated 15.7 years ago by
James W. MacDonald
65k • written 15.7 years ago by
Tarca, Adi
▴ 570
0
votes
4
replies
1.1k
views
RMA on a batch with NA values
probe
probe
updated 15.7 years ago by
James W. MacDonald
65k • written 15.7 years ago by
Tarca, Adi
▴ 570
0
votes
1
reply
847
views
Loading more than 16 annotation packages fails
Annotation
hu35ksubb
Annotation
hu35ksubb
updated 15.8 years ago by
Seth Falcon
▴ 150 • written 15.8 years ago by
Tarca, Adi
▴ 570
0
votes
8
replies
1.7k
views
HumanRef-8_V3
updated 15.9 years ago by
Lynn Amon
▴ 280 • written 15.9 years ago by
Tarca, Adi
▴ 570
0
votes
1
reply
769
views
GOStats question
GO
GOstats
GO
GOstats
updated 17.1 years ago by
James W. MacDonald
65k • written 17.1 years ago by
Tarca, Adi
▴ 570
0
votes
0
replies
1.6k
views
Options for spatial normalization? (Oliver Homann)
SNP
Microarray
Annotation
Normalization
GO
Classification
Cancer
annotate
geneplotter
SNP
17.2 years ago
Tarca, Adi
▴ 570
0
votes
0
replies
803
views
bioinformatics positions available
Classification
Cancer
Classification
Cancer
17.7 years ago
Tarca, Adi
▴ 570
0
votes
0
replies
253
views
multiple comparisons
17.9 years ago
Tarca, Adi
▴ 570
0
votes
0
replies
607
views
alternative CDF
hgu133a
hgu133plus2
cdf
hgu133a
hgu133plus2
cdf
18.0 years ago
Tarca, Adi
▴ 570
0
votes
0
replies
616
views
need help in nnet (madhurima bhattacharjee)
18.4 years ago
Tarca, Adi
▴ 570
0
votes
0
replies
673
views
need a neural network package for microarray data
Normalization
nnNorm
Normalization
nnNorm
18.4 years ago
Tarca, Adi
▴ 570
0
votes
0
replies
828
views
Bug in maNormNN
Microarray
Normalization
GO
Visualization
Network
nnNorm
Microarray
Normalization
GO
18.5 years ago
Tarca, Adi
▴ 570
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