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Comment: Comment: How to visualize these pathways using pathview
5 weeks ago Guido Hooiveld ★ 4.1k
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1
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463
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Answer: Answer: How to generate circular cnetplot and color nodes and edges in the same plot ?
6 weeks ago Guido Hooiveld ★ 4.1k
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0
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464
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Answer: Answer: Problems with GSEA
6 weeks ago Guido Hooiveld ★ 4.1k
0
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1
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456
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Answer: Answer: Error in get_anno_data(ontology) : ontology not supported yet...
11 weeks ago Guido Hooiveld ★ 4.1k
0
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0
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369
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Answer: Answer: Need new version : tx2gene.gencode.v47.csv
12 weeks ago Guido Hooiveld ★ 4.1k
1
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1
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495
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Comment: Comment: pathview - multiple states
3 months ago Guido Hooiveld ★ 4.1k
0
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1
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495
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Comment: Comment: pathview - multiple states
3 months ago Guido Hooiveld ★ 4.1k
0
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1
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1.9k
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Comment: Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db?
3 months ago Guido Hooiveld ★ 4.1k
0
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0
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301
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Answer: Answer: DESeq2 "Not full rank" and "less than full rank" error
3 months ago Guido Hooiveld ★ 4.1k
0
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2
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1.9k
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Comment: Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db?
4 months ago Guido Hooiveld ★ 4.1k
0
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1
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1.9k
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Comment: Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db?
4 months ago Guido Hooiveld ★ 4.1k
0
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1
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1.9k
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Comment: Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db?
4 months ago Guido Hooiveld ★ 4.1k
2
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10
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1.9k
views
incomplete official symbol mitochondrial genes in org.Hs.eg.db?
org.Hs.eg.db
updated 3 months ago by 68k • written 4 months ago by ★ 4.1k
1
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1
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1.0k
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Comment: Comment: Why `FoldEnrichment`,`RichFactor`and `zScore` are not in the ReactomePA::enrichP
4 months ago Guido Hooiveld ★ 4.1k
0
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0
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409
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Comment: Comment: How to subset voomLmFit (MArrayLM) object?
4 months ago Guido Hooiveld ★ 4.1k
3
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3
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409
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How to subset voomLmFit (MArrayLM) object?
limma edgeR
4 months ago Guido Hooiveld ★ 4.1k
0
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1
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824
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Comment: Comment: Trying to convert ATACseq annotations of non-model species into human orthologs,
5 months ago Guido Hooiveld ★ 4.1k
1
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0
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1.4k
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Comment: Comment: clusterProfiler: BgRatio N value does not match the size of the gene universe th
5 months ago Guido Hooiveld ★ 4.1k
1
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1
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1.4k
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Comment: Comment: clusterProfiler: BgRatio N value does not match the size of the gene universe th
5 months ago Guido Hooiveld ★ 4.1k
1
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0
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1.4k
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Comment: Comment: clusterProfiler: BgRatio N value does not match the size of the gene universe th
5 months ago Guido Hooiveld ★ 4.1k
1
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1
reply
1.9k
views
Answer: Answer: How to use compareCluster in ClusterProfiler?
6 months ago Guido Hooiveld ★ 4.1k
0
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0
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788
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Answer: Answer: question about gseGO() in clusterprofiler package
6 months ago Guido Hooiveld ★ 4.1k
0
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0
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1.3k
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Comment: Comment: Error running tximeta
7 months ago Guido Hooiveld ★ 4.1k
1
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0
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794
views
Answer: Answer: Differences between core_enrichment from gsePathway and viewPathway
7 months ago Guido Hooiveld ★ 4.1k
0
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1
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1.3k
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Comment: Comment: Error running tximeta
7 months ago Guido Hooiveld ★ 4.1k
2
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0
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1.4k
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Comment: Comment: Difference between enrichGO results and Enrichr website results
8 months ago Guido Hooiveld ★ 4.1k
1
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1
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2.0k
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Comment: Comment: Most enriched pathway is not expressed when modifying universe parameter
9 months ago Guido Hooiveld ★ 4.1k
0
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0
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1.3k
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Comment: Comment: Cannot install oligo on Fedora
9 months ago Guido Hooiveld ★ 4.1k
0
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1
reply
1.8k
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Comment: Comment: FGSEA pre-ranked input in increasing order or decreasing
9 months ago Guido Hooiveld ★ 4.1k
0
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1
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1.3k
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Comment: Comment: Cannot install oligo on Fedora
9 months ago Guido Hooiveld ★ 4.1k
0
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1
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1.0k
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Comment: Comment: Error in gseDO function
9 months ago Guido Hooiveld ★ 4.1k
0
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0
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844
views
Comment: Comment: How to add Ensembl ids after Pseudobulk analysis by DESeq2
9 months ago Guido Hooiveld ★ 4.1k
1
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1
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1.0k
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Answer: Answer: Error in gseDO function
9 months ago Guido Hooiveld ★ 4.1k
0
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1
reply
1.3k
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Comment: Comment: Cannot install oligo on Fedora
9 months ago Guido Hooiveld ★ 4.1k
1
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9
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1.3k
views
Cannot install oligo on Fedora
oligo source Install
9 months ago Guido Hooiveld ★ 4.1k
0
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0
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849
views
Comment: Comment: pathview error
9 months ago Guido Hooiveld ★ 4.1k
1
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2
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1.1k
views
Comment: Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
9 months ago Guido Hooiveld ★ 4.1k
0
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1
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889
views
Comment: Comment: error running enricher from clusterprofiler
9 months ago Guido Hooiveld ★ 4.1k
0
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1
reply
889
views
Answer: Answer: error running enricher from clusterprofiler
9 months ago Guido Hooiveld ★ 4.1k
1
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1
reply
603
views
Answer: Answer: Erroe when using makeOrgPackageFromNCBI()
9 months ago Guido Hooiveld ★ 4.1k
0
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1
reply
454
views
Comment: Comment: Problem finding certain variables when importing a public database GSE73103
10 months ago Guido Hooiveld ★ 4.1k
0
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0
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981
views
Answer: Answer: Gene set enrichment analysis
10 months ago Guido Hooiveld ★ 4.1k
1
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1
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2.8k
views
Comment: Comment: Trying to use enrichGO
10 months ago Guido Hooiveld ★ 4.1k
1
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2
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2.8k
views
Comment: Comment: Trying to use enrichGO
10 months ago Guido Hooiveld ★ 4.1k
0
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1
reply
2.8k
views
Comment: Comment: Trying to use enrichGO
10 months ago Guido Hooiveld ★ 4.1k
1
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0
replies
458
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Answer: Answer: Cannabis OrgDb
10 months ago Guido Hooiveld ★ 4.1k
0
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1
reply
2.8k
views
Comment: Comment: Trying to use enrichGO
10 months ago Guido Hooiveld ★ 4.1k
0
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1
reply
2.8k
views
Comment: Comment: Trying to use enrichGO
10 months ago Guido Hooiveld ★ 4.1k
2
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0
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628
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Comment: Comment: Cannabis and KEGGgraph
10 months ago Guido Hooiveld ★ 4.1k
1
vote
0
replies
990
views
Answer: Answer: OrgDb for maize
10 months ago Guido Hooiveld ★ 4.1k
722 results • Page 1 of 15
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