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Comment: Comment: Clarification re VST transformed data in DESeq2
3.5 years ago Nikolay Ivanov • 0
3
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4
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4.0k
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Clarification re VST transformed data in DESeq2
DESeq2
updated 3.5 years ago by ★ 4.6k • written 3.5 years ago by • 0
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1.5k
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Using tximeta::summarizeToGene function; Warning message: call dbDisconnect() when finished working with a connection
tximeta
updated 3.5 years ago by 43k • written 3.5 years ago by • 0
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Comment: Comment: DESeq2: NA's in mcols(object)$betaConv
3.5 years ago Nikolay Ivanov • 0
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3
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1.1k
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DESeq2: NA's in mcols(object)$betaConv
DESeq2
updated 3.5 years ago by 43k • written 3.5 years ago by • 0
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0
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2.6k
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Comment: Comment: Regarding transcripts to gene ID conversion in tximport
3.8 years ago Nikolay Ivanov • 0
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2
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2.6k
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Regarding transcripts to gene ID conversion in tximport
salmon tximport DESeq2
3.8 years ago Nikolay Ivanov • 0
0
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1
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2.3k
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Comment: Comment: Warning message when performing Gene Ontology analysis with goseq using hg38
3.8 years ago Nikolay Ivanov • 0
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1
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2.3k
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Comment: Comment: Warning message when performing Gene Ontology analysis with goseq using hg38
3.8 years ago Nikolay Ivanov • 0
0
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0
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2.3k
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Comment: Comment: Warning message when performing Gene Ontology analysis with goseq using hg38
3.8 years ago Nikolay Ivanov • 0
0
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1
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2.3k
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Comment: Comment: Warning message when performing Gene Ontology analysis with goseq using hg38
3.8 years ago Nikolay Ivanov • 0
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9
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2.3k
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Warning message when performing Gene Ontology analysis with goseq using hg38
goseq
updated 3.8 years ago by 67k • written 3.8 years ago by • 0
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0
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5.3k
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Comment: Comment: Importing data into the DESeq2 pipeline using tximport
3.8 years ago Nikolay Ivanov • 0
2
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2
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5.3k
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Importing data into the DESeq2 pipeline using tximport
DESeq2 tximport
3.8 years ago Nikolay Ivanov • 0
1
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1
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772
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Can I add raw counts for duplicated genes?
DESeq2 RNAseq
updated 4.4 years ago by 43k • written 4.4 years ago by • 0
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1
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1.2k
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Adjusting for unwanted variation in DESeq2
DESeq2 deseq2 sva rna-seq differential expression anlaysis
updated 4.8 years ago by 67k • written 4.8 years ago by • 0
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