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Performing DGE analysis with MAST on a variable with more than 2 levels
MAST
DEG
SingleCell
2.5 years ago
zroger499
• 0
0
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0
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966
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Issues geting meaninfull results for single cell DGE using MAST
MAST
SingleCell
2.8 years ago
zroger499
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0
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1
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995
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Comment:
Comment: Questions regarding DESeq2 experimental setup and lfcShrink
3.7 years ago
zroger499
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1
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3
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995
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Questions regarding DESeq2 experimental setup and lfcShrink
DESeq2
RNA-seq
updated 3.7 years ago by
Michael Love
43k • written 3.7 years ago by
zroger499
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0
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2.1k
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Comment:
C: Cannot extract size factor from DESeq2 analysis
4.6 years ago
zroger499
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4
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3
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2.1k
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Cannot extract size factor from DESeq2 analysis
deseq2
tximport
4.6 years ago
zroger499
• 0
0
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3.4k
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Comment:
C: Importing Kallisto counts with tximport
4.6 years ago
zroger499
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0
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0
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3.4k
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Comment:
C: Importing Kallisto counts with tximport
4.6 years ago
zroger499
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0
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2
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3.4k
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Comment:
C: Importing Kallisto counts with tximport
4.6 years ago
zroger499
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1
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9
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3.4k
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Importing Kallisto counts with tximport
tximport
Kallisto
H5Fopen
updated 4.6 years ago by
Michael Love
43k • written 4.6 years ago by
zroger499
• 0
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