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Answer: Answer: GSVA ssGSEA vs. Broad implementation of ssGSEA
12 months ago Tyler Sagendorf ▴ 10
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Answer: Answer: Its possible to remove annotation names using anno_simple in ComplexHeatmap
12 months ago Tyler Sagendorf ▴ 10
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Comment: Comment: Heatmap from the output of GSEA clusterProfiler?
14 months ago Tyler Sagendorf ▴ 10
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1
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1.2k
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Comment: Comment: using limma trend workflow in CAMERA
14 months ago Tyler Sagendorf ▴ 10
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1
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2.2k
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Comment: Comment: Heatmap from the output of GSEA clusterProfiler?
14 months ago Tyler Sagendorf ▴ 10
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1
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933
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Comment: Comment: voom does not seem to properly correct for library size
14 months ago Tyler Sagendorf ▴ 10
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1
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963
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Comment: Comment: One-sided tests with CAMERA-PR
15 months ago Tyler Sagendorf ▴ 10
3
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3
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963
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One-sided tests with CAMERA-PR
CAMERA limma
updated 15 months ago by 53k • written 15 months ago by ▴ 10
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1.5k
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Comment: Comment: CAMERA + Gene Ontology Gene Sets
21 months ago Tyler Sagendorf ▴ 10
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3
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1.5k
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CAMERA + Gene Ontology Gene Sets
GO limma CAMERA
updated 21 months ago by 53k • written 21 months ago by ▴ 10
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Comment: Comment: "Counts" in enrichGO
21 months ago Tyler Sagendorf ▴ 10
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1.4k
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Comment: Comment: Can't post a question containing code?
21 months ago Tyler Sagendorf ▴ 10
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Comment: Comment: limma + voom combine voomWithQualityWeights and duplicateCorrelation
24 months ago Tyler Sagendorf ▴ 10
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1.4k
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Comment: Comment: limma + voom combine voomWithQualityWeights and duplicateCorrelation
24 months ago Tyler Sagendorf ▴ 10
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4
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1.4k
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limma + voom combine voomWithQualityWeights and duplicateCorrelation
voom RNASeq limma
24 months ago Tyler Sagendorf ▴ 10
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5
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3.6k
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limma-trend and voom results do not agree
limma limma-trend voom RNASeq
4.0 years ago • updated 3.9 years ago Tyler Sagendorf ▴ 10
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Answer: Answer: limma-trend and voom results do not agree
3.9 years ago Tyler Sagendorf ▴ 10
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3.6k
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Comment: Comment: limma-trend and voom results do not agree
4.0 years ago Tyler Sagendorf ▴ 10
0
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0
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3.6k
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Comment: Comment: limma-trend and voom results do not agree
4.0 years ago Tyler Sagendorf ▴ 10
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