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2.4k
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microarray outlier detection
Microarray Microarray
updated 12.2 years ago by ▴ 200 • written 12.2 years ago by ★ 13k
0
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0
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906
views
Can I input ordinal variables into a model in Limma?
Microarray limma Microarray limma
12.2 years ago Guest User ★ 13k
0
votes
1
reply
873
views
Genes, their domains, and a list of superimposed mutations
updated 12.2 years ago by 25k • written 12.2 years ago by ★ 13k
0
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1
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1.6k
views
Depth of Coverage and Base counts from BAM file
updated 12.2 years ago by ★ 1.3k • written 12.2 years ago by ★ 13k
0
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0
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834
views
beadarray\'s processSwathData for HumanHT12v4, with 3 swaths
12.2 years ago Guest User ★ 13k
0
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3
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2.3k
views
edgeR topTags output (logFC)
edgeR edgeR
updated 12.2 years ago by 53k • written 12.3 years ago by ★ 13k
0
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1
reply
837
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import only partial samples of an array
updated 12.2 years ago by ▴ 440 • written 12.2 years ago by ★ 13k
0
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0
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1.2k
views
Package/Function for Single Channel Microarray Spatial Normalization?
marray OLIN marray OLIN
12.3 years ago Guest User ★ 13k
0
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1
reply
1.7k
views
Using the genes.count-tracking file from cuffdiff in DESeq
DESeq DESeq
updated 12.3 years ago by 43k • written 12.3 years ago by ★ 13k
0
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0
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1.1k
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Complex Limma design: technical replication, biological replication and repeated experiment
Microarray limma Microarray limma
12.3 years ago Guest User ★ 13k
0
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0
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1.1k
views
edgeR annotation mission from topTags output
edgeR edgeR
12.3 years ago Guest User ★ 13k
0
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1
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1.2k
views
HTqPCR normalization issue ?
Normalization HTqPCR Normalization HTqPCR
updated 12.3 years ago by ★ 8.2k • written 12.3 years ago by ★ 13k
0
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2
replies
2.0k
views
frma normalization and batch effects
Normalization frma Normalization frma
updated 12.3 years ago by ★ 13k • written 12.3 years ago by ★ 13k
0
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1
reply
1.1k
views
TCC RNAseq normalization package error
RNASeq TCC RNASeq TCC
updated 12.3 years ago by ★ 7.9k • written 12.3 years ago by ★ 13k
0
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1
reply
853
views
NAs as result for enrichPathway
updated 12.3 years ago by ▴ 20 • written 12.3 years ago by ★ 13k
0
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0
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1.9k
views
error while using goProfiles package on arabidopsis entrez gene IDs
goProfiles goProfiles
12.3 years ago Guest User ★ 13k
0
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0
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964
views
error of \"subscript out of bounds\" while applying basicProfile func
12.3 years ago Guest User ★ 13k
0
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0
replies
1.5k
views
Rankprod- gene appearing in both up and down regulated lists?
RankProd RankProd
12.3 years ago Guest User ★ 13k
0
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0
replies
1.2k
views
question about package AgiMicroRna
Normalization GO vsn Normalization GO vsn
12.3 years ago Guest User ★ 13k
0
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2
replies
2.2k
views
Reading Illumina data from GenomeStudio in limma
probe lumi probe lumi
updated 12.3 years ago by ★ 3.6k • written 12.3 years ago by ★ 13k
0
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2
replies
2.5k
views
Converting \"data.frame\" to appropriate format for tau.dist() in bioDist library
bioDist bioDist
updated 12.3 years ago by ▴ 470 • written 12.3 years ago by ★ 13k
0
votes
1
reply
892
views
RMA probe summarization when sizes of probesets are unequal
Microarray Normalization probe oligo Microarray Normalization probe oligo
updated 12.3 years ago by 68k • written 12.3 years ago by ★ 13k
0
votes
2
replies
6.9k
views
DESeq2 dependency hell
DESeq2 DESeq2
updated 12.3 years ago by 68k • written 12.3 years ago by ★ 13k
0
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4
replies
1.5k
views
I need BSgenome for Eucalyptus grandis
BSgenome BSgenome MEDIPS BSgenome BSgenome MEDIPS
updated 12.3 years ago by ★ 7.2k • written 12.3 years ago by ★ 13k
0
votes
1
reply
782
views
edgeR v2.6 vs. v3.2.4
edgeR edgeR
updated 12.3 years ago by ★ 7.9k • written 12.3 years ago by ★ 13k
0
votes
2
replies
1.0k
views
Limma\'s roast() does not accept weigths in combination with block
updated 12.3 years ago by 53k • written 12.3 years ago by ★ 13k
0
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0
replies
1.5k
views
CGHCall problems
aCGH probe DNAcopy aCGH CGHcall aCGH probe DNAcopy aCGH CGHcall
12.3 years ago Guest User ★ 13k
0
votes
1
reply
610
views
Limma: how to set the selection by p-value
limma limma
updated 12.3 years ago by 68k • written 12.3 years ago by ★ 13k
0
votes
1
reply
801
views
Interpretation of output files
Annotation rtracklayer TSSi Annotation rtracklayer TSSi
updated 12.3 years ago by ★ 1.3k • written 12.3 years ago by ★ 13k
0
votes
1
reply
1.1k
views
Failure to update to Bioconductor 2.12 from bioconductor 2.11
updated 12.3 years ago by 68k • written 12.3 years ago by ★ 13k
0
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6
replies
2.4k
views
error when loading mzR
xcms mzR xcms mzR
updated 12.3 years ago by ★ 13k • written 12.3 years ago by ★ 13k
0
votes
3
replies
2.4k
views
Problem installing genefilter (Ubuntu 12.04; Bioconductor v2.12)
genefilter genefilter
updated 12.3 years ago by 68k • written 12.3 years ago by ★ 13k
0
votes
1
reply
763
views
Error in extracting genes from Goterms using GOStats package
Annotation GO GOstats Annotation GO GOstats
updated 12.3 years ago by 68k • written 12.3 years ago by ★ 13k
0
votes
1
reply
925
views
issue on removing all NAs (UNANNOTATED) rows
probe limma probe limma
updated 12.3 years ago by 68k • written 12.3 years ago by ★ 13k
0
votes
1
reply
2.1k
views
How to subtract the background from foreground values in GenePix files
Normalization limma marray Normalization limma marray
updated 12.3 years ago by 68k • written 12.3 years ago by ★ 13k
0
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0
replies
1.1k
views
read.exon( )
annmap annmap
12.3 years ago Guest User ★ 13k
0
votes
1
reply
1.0k
views
problem with installation package useR2013
updated 12.3 years ago by ★ 8.2k • written 12.3 years ago by ★ 13k
0
votes
4
replies
3.4k
views
org.Hs.eg.db package loading issues
updated 12.3 years ago by ★ 8.2k • written 12.3 years ago by ★ 13k
0
votes
3
replies
2.2k
views
oligo package attaching phenodata for HuGene2.0 ST array
oligo oligo
updated 12.3 years ago by 68k • written 12.3 years ago by ★ 13k
0
votes
1
reply
1.4k
views
Remove samples and probes from Illumina 450K data
minfi minfi
updated 12.3 years ago by 68k • written 12.3 years ago by ★ 13k
0
votes
8
replies
2.8k
views
GSE states
updated 12.3 years ago by ★ 4.2k • written 12.3 years ago by ★ 13k
0
votes
1
reply
875
views
Conservative results using DEXSeq
DEXSeq DEXSeq
updated 12.3 years ago by ★ 3.8k • written 12.3 years ago by ★ 13k
0
votes
3
replies
1.2k
views
Doubt on time course design
edgeR edgeR
updated 12.4 years ago by ▴ 350 • written 12.4 years ago by ★ 13k
0
votes
5
replies
2.0k
views
AWS cluster not finding installed R packages
updated 12.4 years ago by ★ 8.2k • written 12.4 years ago by ★ 13k
0
votes
1
reply
1.9k
views
Rgraphviz multiline edge label
graph Rgraphviz graph Rgraphviz
updated 12.4 years ago by 6.7k • written 12.4 years ago by ★ 13k
0
votes
1
reply
1.6k
views
Using gcrma with \"Affymetrix GeneChip miRNA v1.0\" data
miRNA gcrma miRNA gcrma
updated 12.4 years ago by 21k • written 12.4 years ago by ★ 13k
0
votes
2
replies
5.6k
views
Problem installing \'survival\' package/ Fix request + other options?
Survival Survival
updated 12.4 years ago by 68k • written 12.4 years ago by ★ 13k
0
votes
1
reply
1.1k
views
mock comparison p-value histogram in DEXSeq
DEXSeq DEXSeq
updated 12.4 years ago by ★ 1.9k • written 12.4 years ago by ★ 13k
0
votes
0
replies
1.5k
views
readPositionalInfo in snapCGH for preparing CNA files for DNAcopy
aCGH DNAcopy aCGH snapCGH aCGH DNAcopy aCGH snapCGH
12.4 years ago Guest User ★ 13k
0
votes
1
reply
1.3k
views
MakeDBPackage fails with SQL error
updated 12.4 years ago by ▴ 10 • written 12.4 years ago by ★ 13k
1,206 results • Page 12 of 25
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