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4
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6.0k
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pca plot for gene expression
Cancer Cancer
updated 11.6 years ago by 43k • written 11.6 years ago by ★ 13k
0
votes
1
reply
896
views
co-expressed genes
updated 11.6 years ago by ▴ 20 • written 11.6 years ago by ★ 13k
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1
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1.2k
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read.maimages
Microarray limma Microarray limma
updated 11.6 years ago by ★ 1.1k • written 11.6 years ago by ★ 13k
0
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1
reply
1.4k
views
Contrast matrix in limma
limma limma
updated 11.6 years ago by 53k • written 11.6 years ago by ★ 13k
0
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0
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989
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pca plot
Cancer Cancer
11.6 years ago Guest User ★ 13k
0
votes
2
replies
2.2k
views
Complex contrasts for between and within subject comparisons
edgeR edgeR
updated 11 months ago by • 0 • written 11.6 years ago by ★ 13k
0
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3
replies
2.2k
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XPS with Arabidopsis Gene 1.1 ST Array Strip
xps xps
updated 11.6 years ago by ★ 3.9k • written 11.6 years ago by ★ 13k
0
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2
replies
2.4k
views
IRanges
updated 11.6 years ago by ★ 11k • written 11.6 years ago by ★ 13k
0
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0
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1.2k
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ggbiplot
11.6 years ago Guest User ★ 13k
0
votes
5
replies
3.0k
views
failing to filter ExpressionSet object using nsFilter
hgu95av2 hgu95av2
updated 11.6 years ago by 25k • written 11.6 years ago by ★ 13k
0
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1
reply
1.9k
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Error while running DESeq
DESeq DESeq
updated 11.7 years ago by ★ 3.8k • written 11.7 years ago by ★ 13k
0
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2
replies
3.6k
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Basemean calculations with DESeq2
DESeq DESeq2 DESeq DESeq2
updated 11.7 years ago by 43k • written 11.7 years ago by ★ 13k
0
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2
replies
2.4k
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GenomeinfoDB
Mus musculus GenomeInfoDb Mus musculus GenomeInfoDb
updated 11.7 years ago by ▴ 390 • written 11.7 years ago by ★ 13k
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1
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1.8k
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loading qvalue library causes R to abort
qvalue qvalue
updated 11.7 years ago by ★ 8.2k • written 11.7 years ago by ★ 13k
0
votes
1
reply
532
views
how to remove probeset
Annotation limma Annotation limma
updated 11.7 years ago by 68k • written 11.7 years ago by ★ 13k
0
votes
7
replies
2.5k
views
No significant p-values
DESeq DESeq
updated 11.7 years ago by ▴ 330 • written 11.7 years ago by ★ 13k
0
votes
3
replies
2.1k
views
create the expression set
limma limma
updated 11.7 years ago by 68k • written 11.7 years ago by ★ 13k
2
votes
1
reply
2.3k
views
DESeq2 : Using Normalised ReadCount matrix from EDAseq in DESeq2
Normalization EDASeq DESeq2 Normalization EDASeq DESeq2
updated 11.7 years ago by 43k • written 11.7 years ago by ★ 13k
0
votes
4
replies
1.3k
views
apply function on genomicsRanges ob
updated 11.7 years ago by ★ 6.8k • written 11.7 years ago by ★ 13k
0
votes
1
reply
890
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Problom in performing Gene Set Test using KEGG
updated 11.7 years ago by 68k • written 11.7 years ago by ★ 13k
0
votes
0
replies
881
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Complex between and within sample design
11.7 years ago Guest User ★ 13k
0
votes
3
replies
1.7k
views
Problem with removing duplicated probes of datasets without annotation
Annotation probe Annotation probe
updated 11.7 years ago by ★ 13k • written 11.7 years ago by ★ 13k
0
votes
2
replies
1.6k
views
error on detecting regions
ASSIGN ASSIGN
updated 11.7 years ago by ▴ 440 • written 11.7 years ago by ★ 13k
0
votes
2
replies
1.8k
views
Can my problem be addressed with Bioconductor?
Genetics GOstats SNPchip topGO Genetics GOstats SNPchip topGO
updated 11.7 years ago by 68k • written 11.7 years ago by ★ 13k
0
votes
2
replies
2.8k
views
Genomic Features - makeTranscriptDbFromGFF()
Organism TranscriptDb GenomicFeatures Organism TranscriptDb GenomicFeatures
updated 11.7 years ago by ★ 7.2k • written 11.7 years ago by ★ 13k
0
votes
1
reply
1.1k
views
non specific filtering 27k methlylation chip
updated 11.7 years ago by ▴ 190 • written 11.7 years ago by ★ 13k
0
votes
2
replies
1.9k
views
Opening Data for NormqPCR (readqPCR)
updated 11.7 years ago by ▴ 60 • written 11.7 years ago by ★ 13k
0
votes
3
replies
1.4k
views
DESeq analysis of resistance data
RNASeq Cancer DESeq2 RNASeq Cancer DESeq2
updated 11.7 years ago by 43k • written 11.7 years ago by ★ 13k
0
votes
0
replies
10k
views
virtualArray vignette does not work: 'data' must be of a vector type, was 'NULL'
Microarray Annotation Preprocessing hgu133plus2 hgug4112a virtualArray Microarray hgug4112a
11.7 years ago Guest User ★ 13k
0
votes
7
replies
2.3k
views
mutant allele read counts
VariantAnnotation VariantAnnotation VariantAnnotation VariantAnnotation
updated 11.7 years ago by ★ 6.8k • written 11.7 years ago by ★ 13k
0
votes
2
replies
2.3k
views
xy-plot of fcs fails: undefined column selected
PROcess PROcess
updated 11.7 years ago by ▴ 20 • written 11.7 years ago by ★ 13k
2
votes
2
replies
4.8k
views
readGappedAlignments not working in Rsamtools
RNASeq RNASeq
updated 11.7 years ago by ★ 6.8k • written 11.7 years ago by ★ 13k
1
vote
0
replies
1.4k
views
HTqPCR package data layout - how flexible is it?
qPCR qPCR
11.7 years ago Guest User ★ 13k
0
votes
0
replies
1.1k
views
error in subsetting GeneFeatureSet with Oligo
11.7 years ago Guest User ★ 13k
0
votes
4
replies
1.2k
views
Query regarding SomatiSignature bioconductor package
updated 11.7 years ago by ★ 1.3k • written 11.7 years ago by ★ 13k
0
votes
1
reply
1.2k
views
DESeq: Hypothesis testing in multifactor design
DESeq DESeq
updated 11.7 years ago by 43k • written 11.7 years ago by ★ 13k
0
votes
3
replies
3.3k
views
error: 'BiocInstaller' package not in repository
11.7 years ago Guest User ★ 13k
0
votes
1
reply
3.3k
views
Answer: A: error: 'BiocInstaller' package not in repository
11.7 years ago Guest User ★ 13k
0
votes
3
replies
1.2k
views
Installing Workflows for Oligonucleotide arrays
Microarray Microarray
updated 11.7 years ago by ★ 8.2k • written 11.7 years ago by ★ 13k
0
votes
1
reply
1.2k
views
topGO genes associated with GO terms
Annotation GO Annotation GO
updated 11.7 years ago by ★ 13k • written 11.7 years ago by ★ 13k
0
votes
1
reply
3.5k
views
annotations for arrays
Microarray Annotation virtualArray Microarray Annotation virtualArray
updated 11.7 years ago by ★ 7.2k • written 11.7 years ago by ★ 13k
0
votes
6
replies
2.3k
views
Rbowtie - compilation error
updated 11.7 years ago by ▴ 350 • written 11.7 years ago by ★ 13k
0
votes
1
reply
1.4k
views
ComBat() -- run with one sample in one batch
updated 11.7 years ago by ★ 3.0k • written 11.7 years ago by ★ 13k
0
votes
1
reply
2.6k
views
Worker count specification in functions using bplapply from the BiocParallel pkg
VariantTools BiocParallel GenomicAlignments VariantTools BiocParallel GenomicAlignments
updated 11.7 years ago by 25k • written 11.7 years ago by ★ 13k
0
votes
3
replies
1.7k
views
ParseMetaFromGtfFile is.na() error
Annotation SCAN.UPC Annotation SCAN.UPC
updated 11.7 years ago by ★ 11k • written 11.7 years ago by ★ 13k
0
votes
2
replies
1.2k
views
install previous version of DEXSeq (1.6.0)
DEXSeq DEXSeq
updated 11.7 years ago by ▴ 120 • written 11.7 years ago by ★ 13k
0
votes
1
reply
1.4k
views
Affymetrix HuGene 2.0 ST annotation
Annotation limma Annotation limma
updated 11.7 years ago by 68k • written 11.7 years ago by ★ 13k
0
votes
0
replies
1.6k
views
compiler error: Rbowtie
Rbowtie Rbowtie
11.7 years ago Guest User ★ 13k
0
votes
1
reply
1.6k
views
DEXSeqDataSetFromHTSeq Error
DEXSeq DEXSeq
updated 11.7 years ago by ★ 3.8k • written 11.7 years ago by ★ 13k
0
votes
0
replies
1.3k
views
SNP ID mapping with Oligo package
SNP SNP
11.7 years ago Guest User ★ 13k
1,206 results • Page 3 of 25
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