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Answer: Answer: flowStats Search Error
24 days ago James W. MacDonald 65k
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Comment: Comment: what is the sampleFiles
24 days ago James W. MacDonald 65k
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985
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Comment: Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
4 weeks ago James W. MacDonald 65k
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985
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Comment: Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
4 weeks ago James W. MacDonald 65k
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985
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Answer: Answer: Convert Seurat Object to Summarised Experiment or ExpressionSet
4 weeks ago James W. MacDonald 65k
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507
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Comment: Comment: GSVA on separate healthy and disease datasets
4 weeks ago James W. MacDonald 65k
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442
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Comment: Comment: Not fully paired differential gene expression analysis
4 weeks ago James W. MacDonald 65k
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356
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Answer: Answer: Why is my gene not significantly differentially expressed?
4 weeks ago James W. MacDonald 65k
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442
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Answer: Answer: Not fully paired differential gene expression analysis
4 weeks ago James W. MacDonald 65k
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156
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Answer: Answer: BAM write error in HTSeqGenie
4 weeks ago James W. MacDonald 65k
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1
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507
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Answer: Answer: GSVA on separate healthy and disease datasets
4 weeks ago James W. MacDonald 65k
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469
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Comment: Comment: Obtaining pheno data from CEL files
4 weeks ago James W. MacDonald 65k
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354
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Answer: Answer: permutation test in edgeR
4 weeks ago James W. MacDonald 65k
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185
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Answer: Answer: How can I create a GO plot with ggpubr and clusterProfiler libraries (begginer)
4 weeks ago James W. MacDonald 65k
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269
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Comment: Comment: Lib sizes in the DGE object are different from original lib sizes
5 weeks ago James W. MacDonald 65k
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322
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Comment: Comment: Help with design.matrix
5 weeks ago James W. MacDonald 65k
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269
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Answer: Answer: Lib sizes in the DGE object are different from original lib sizes
5 weeks ago James W. MacDonald 65k
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242
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Answer: Answer: MethylKit read issue
5 weeks ago James W. MacDonald 65k
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322
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Answer: Answer: Help with design.matrix
5 weeks ago James W. MacDonald 65k
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178
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Comment: Comment: What to the log 2 fold changes mean using LRT on time course in DESeq2
5 weeks ago James W. MacDonald 65k
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178
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Answer: Answer: What to the log 2 fold changes mean using LRT on time course in DESeq2
5 weeks ago James W. MacDonald 65k
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178
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Answer: Answer: DESeq2 - Missing values in count matrix
5 weeks ago James W. MacDonald 65k
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450
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Comment: Comment: DESeq2 step-by-step Normalization then DGE separately & Normalization methods an
5 weeks ago James W. MacDonald 65k
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1
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450
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Answer: Answer: DESeq2 step-by-step Normalization then DGE separately & Normalization methods an
5 weeks ago James W. MacDonald 65k
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1
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198
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Answer: Answer: voom(calcNormFactors()) for normalization of RNAseq counts for WGCNA
5 weeks ago James W. MacDonald 65k
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469
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Comment: Comment: Obtaining pheno data from CEL files
5 weeks ago James W. MacDonald 65k
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0
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346
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Comment: Comment: unable to access Annotationhub latest record
5 weeks ago James W. MacDonald 65k
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1
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469
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Comment: Comment: Obtaining pheno data from CEL files
5 weeks ago James W. MacDonald 65k
0
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1
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346
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Answer: Answer: unable to access Annotationhub latest record
5 weeks ago James W. MacDonald 65k
0
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168
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Comment: Comment: No output from read.bismark with bismark cov.files
5 weeks ago James W. MacDonald 65k
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177
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Answer: Answer: pca with VST of DESeq2 give 100% variance in PC1
5 weeks ago James W. MacDonald 65k
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151
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Answer: Answer: Multiple affymatrix IDs mapping to a single gene name
5 weeks ago James W. MacDonald 65k
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2
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418
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Comment: Comment: Internet connection for Bioconductor packages in Rstudio in Iran...
5 weeks ago James W. MacDonald 65k
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418
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Comment: Comment: Internet connection for Bioconductor packages in Rstudio in Iran...
5 weeks ago James W. MacDonald 65k
0
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111
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Answer: Answer: Brachypodium distachyon db
5 weeks ago James W. MacDonald 65k
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1
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191
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Answer: Answer: How to make GSEAplot with chip set
5 weeks ago James W. MacDonald 65k
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1
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182
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Answer: Answer: Gene Ontology doubt
5 weeks ago James W. MacDonald 65k
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353
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Comment: Comment: fgsea fork
6 weeks ago James W. MacDonald 65k
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2
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255
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Answer: Answer: Minfi - estimatecellscount
6 weeks ago James W. MacDonald 65k
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235
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Answer: Answer: WGCNA: analysis of complex trait associations with regressions
6 weeks ago James W. MacDonald 65k
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142
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Answer: Answer: Trimming a section of a scaffold from a genome
6 weeks ago James W. MacDonald 65k
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551
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Comment: Comment: Microarray Limma Model fitting and DEG
6 weeks ago James W. MacDonald 65k
1
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2
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551
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Answer: Answer: Microarray Limma Model fitting and DEG
6 weeks ago James W. MacDonald 65k
1
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1
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233
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Answer: Answer: Problem with maplot {affy} method when using rma {affy} method output as its inp
6 weeks ago James W. MacDonald 65k
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0
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183
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Answer: Answer: bioconductor emailing list
6 weeks ago James W. MacDonald 65k
2
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0
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419
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Comment: Comment: Function 'sexp_as_cholmod_sparse' doesn't exist in the package 'Matrix'
6 weeks ago James W. MacDonald 65k
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1
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224
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Answer: Answer: How to extract counts from a DESeq dataset ordered by a specific sample?
6 weeks ago James W. MacDonald 65k
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0
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470
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Comment: Comment: Batch Effect Correction, Gene Filtering
7 weeks ago James W. MacDonald 65k
2
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0
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470
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Comment: Comment: Batch Effect Correction, Gene Filtering
7 weeks ago James W. MacDonald 65k
2
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1
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470
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Answer: Answer: Batch Effect Correction, Gene Filtering
7 weeks ago James W. MacDonald 65k
8,384 results • Page 2 of 168
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