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GENESIS: error in crossprod
GENESIS
3 months ago Stephanie M. Gogarten ▴ 870
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225
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Answer: Answer: GENESIS: error in crossprod
3 months ago Stephanie M. Gogarten ▴ 870
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430
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Answer: Answer: GENESIS: Can not use GdsGenotypeReader to read a gds file
5 months ago Stephanie M. Gogarten ▴ 870
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416
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Comment: Comment: SKAT-O method using GENESIS, question about range iterator using SeqVarWindowIte
6 months ago Stephanie M. Gogarten ▴ 870
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618
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Answer: Answer: Help for SeqVarData function
9 months ago Stephanie M. Gogarten ▴ 870
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0
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787
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Comment: Comment: assocTestSingle output with GxE
10 months ago Stephanie M. Gogarten ▴ 870
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1
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787
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Comment: Comment: assocTestSingle output with GxE
10 months ago Stephanie M. Gogarten ▴ 870
1
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1
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787
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Answer: Answer: assocTestSingle output with GxE
11 months ago Stephanie M. Gogarten ▴ 870
1
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0
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882
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Comment: Comment: Question about GWASTools gdsSubset
15 months ago Stephanie M. Gogarten ▴ 870
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1
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882
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Answer: Answer: Question about GWASTools gdsSubset
15 months ago Stephanie M. Gogarten ▴ 870
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1.1k
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Comment: Comment: Add GP values to VCF
16 months ago Stephanie M. Gogarten ▴ 870
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3
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1.1k
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Add GP values to VCF
VariantAnnotation
16 months ago Stephanie M. Gogarten ▴ 870
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1.1k
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Answer: Answer: Add GP values to VCF
16 months ago Stephanie M. Gogarten ▴ 870
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719
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Answer: Answer: kinToMatrix creates an empty matrix (except for diagonal 0.5 values)
19 months ago Stephanie M. Gogarten ▴ 870
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2
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2.6k
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merging VCF files
VariantAnnotation VariantAnnotation VariantAnnotation VariantAnnotation
written 11.4 years ago by ▴ 870
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627
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warning for gsutil_requesterpays when reading from gsutil_pipe
AnVIL
updated 2.2 years ago by 25k • written 2.3 years ago by ▴ 870
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970
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Answer: Answer: How to project a new vector onto PCA space using snpgdsPCA( )?
2.2 years ago Stephanie M. Gogarten ▴ 870
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1.1k
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Answer: Answer: SNP annotation
2.3 years ago Stephanie M. Gogarten ▴ 870
1
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1
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657
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Can I write to "Workspace data" table with the AnVIL package?
AnVIL
updated 2.4 years ago by 25k • written 2.4 years ago by ▴ 870
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1.0k
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Comment: Comment: Error "unauthorized" in avtable_import
2.5 years ago Stephanie M. Gogarten ▴ 870
1
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3
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1.0k
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Error "unauthorized" in avtable_import
AnVIL
2.5 years ago Stephanie M. Gogarten ▴ 870
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1
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853
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Approximations to Est and Est.SE in GENESIS
GENESIS
3.4 years ago Stephanie M. Gogarten ▴ 870
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853
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Answer: Answer: Approximations to Est and Est.SE in GENESIS
3.4 years ago Stephanie M. Gogarten ▴ 870
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0
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695
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X chromosome analyses for males in GENESIS
GENESIS
3.5 years ago Stephanie M. Gogarten ▴ 870
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1.4k
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Comment: C: Alternate allele for GENESIS?
3.7 years ago Stephanie M. Gogarten ▴ 870
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1.4k
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Comment: C: Alternate allele for GENESIS?
3.7 years ago Stephanie M. Gogarten ▴ 870
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2
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1.4k
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Answer: A: Alternate allele for GENESIS?
3.7 years ago Stephanie M. Gogarten ▴ 870
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1
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797
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using GENESIS R package with non-human species
genesis gwastools
3.8 years ago Stephanie M. Gogarten ▴ 870
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797
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Answer: A: using GENESIS R package with non-human species
3.8 years ago Stephanie M. Gogarten ▴ 870
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1
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916
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Answer: A: Association testing model in GENESIS
3.9 years ago Stephanie M. Gogarten ▴ 870
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1.1k
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Answer: A: GENESIS multiple gds files
3.9 years ago Stephanie M. Gogarten ▴ 870
1
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0
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1.4k
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Answer: A: How to imports DS field from VCF files with SeqArray seqVCF2GDS()
4.0 years ago Stephanie M. Gogarten ▴ 870
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1.5k
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Comment: C: Why is assocTestMM running with only a fraction of SNPs in genotype data?
4.2 years ago Stephanie M. Gogarten ▴ 870
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0
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1.5k
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Comment: C: GWASTools for analyzing Canine_HD genotyping data
4.2 years ago Stephanie M. Gogarten ▴ 870
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1
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1.5k
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Comment: C: Question: GENESIS: assocTestSingle() is not giving any output; guessing that it
4.3 years ago Stephanie M. Gogarten ▴ 870
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1
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1.5k
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Comment: C: Question: GENESIS: assocTestSingle() is not giving any output; guessing that it
4.3 years ago Stephanie M. Gogarten ▴ 870
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1
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1.5k
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Comment: C: Question: GENESIS: assocTestSingle() is not giving any output; guessing that it
4.3 years ago Stephanie M. Gogarten ▴ 870
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1
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1.5k
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Comment: C: Question: GENESIS: assocTestSingle() is not giving any output; guessing that it
4.3 years ago Stephanie M. Gogarten ▴ 870
1
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0
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677
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Answer: A: Does GENESIS match scan IDs for genotype and phenotype data?
4.3 years ago Stephanie M. Gogarten ▴ 870
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0
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1.4k
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Answer: A: SeqVarData Error sample.id in sampleData does not match GDS file
4.4 years ago Stephanie M. Gogarten ▴ 870
2
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1
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814
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Why did the Wald test disappear from GENESIS?
genesis
4.5 years ago Stephanie M. Gogarten ▴ 870
1
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0
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814
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Answer: A: Why did the Wald test disappear from GENESIS?
4.5 years ago Stephanie M. Gogarten ▴ 870
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1
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1.1k
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Comment: C: Sporadic missingness with admixmmap
4.6 years ago Stephanie M. Gogarten ▴ 870
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0
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1.0k
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Answer: A: Calculating the z score from wald test association results in GENESIS
4.6 years ago Stephanie M. Gogarten ▴ 870
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1
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1.4k
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Comment: C: Interpreting the output of score test using GENESIS
4.6 years ago Stephanie M. Gogarten ▴ 870
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2
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1.4k
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Answer: A: Interpreting the output of score test using GENESIS
4.6 years ago Stephanie M. Gogarten ▴ 870
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1
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1.1k
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Answer: A: Sporadic missingness with admixmmap
4.7 years ago Stephanie M. Gogarten ▴ 870
1
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1
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1.2k
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Answer: A: seqVCF2GDS Error Converting VCF to GDS file
4.8 years ago Stephanie M. Gogarten ▴ 870
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1
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1.2k
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Answer: A: GENESIS: ascertainment in GWAS
4.8 years ago Stephanie M. Gogarten ▴ 870
1
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1
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1.5k
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Comment: C: sample ids not matching when creating SeqVarData object
4.8 years ago Stephanie M. Gogarten ▴ 870
161 results • Page 1 of 4
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