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Answer: A: question about limma
14.6 years ago Richard Friedman ★ 2.0k
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841
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AgiMicroRNA and Extra columns in Agilent Mouse miRNA Microarray Release 12.0 G4471A-021828.
miRNA Microarray Cancer microRNA miRNA Microarray Cancer microRNA
14.6 years ago Richard Friedman ★ 2.0k
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Answer: A: Error message with rmaMicroRna on mouse data in AgiMicroRNA
14.6 years ago Richard Friedman ★ 2.0k
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2
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870
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Comment: C: Error Message with RMA normalization in AgiMicroRNA
14.6 years ago Richard Friedman ★ 2.0k
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4
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870
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Error Message with RMA normalization in AgiMicroRNA
Cancer Cancer
updated 14.6 years ago by 67k • written 14.6 years ago by ★ 2.0k
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1
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903
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error message in cvArray command in AgiMicroRna
Cancer Cancer
updated 14.6 years ago by ▴ 460 • written 14.6 years ago by ★ 2.0k
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1
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1.1k
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Difficulty installing oneChannelGUI in Vista
Cancer affylmGUI oneChannelGUI Cancer affylmGUI oneChannelGUI
updated 14.6 years ago by 67k • written 14.6 years ago by ★ 2.0k
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1
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1.0k
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Multiple genes per probeset
Annotation Cancer mouse4302 annaffy ASSIGN Annotation Cancer mouse4302 annaffy ASSIGN
updated 14.8 years ago by 67k • written 14.8 years ago by ★ 2.0k
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Comment: C: Query regarding AffylmGUI
14.8 years ago Richard Friedman ★ 2.0k
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2.0k
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Answer: A: BLAST E-value
14.9 years ago Richard Friedman ★ 2.0k
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921
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Answer: A: Improvements on GCRMA function
15.0 years ago Richard Friedman ★ 2.0k
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0
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811
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Answer: A: how to merge replicate spots
15.7 years ago Richard Friedman ★ 2.0k
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1.0k
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spiked controls wrong order on samples wit 2 rounds of amplification normalize with GCRMA
Microarray Cancer affy gcrma affyPLM Microarray Cancer affy gcrma affyPLM
16.3 years ago Richard Friedman ★ 2.0k
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1.0k
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Answer: A: kinexus antibody arrays
16.4 years ago Richard Friedman ★ 2.0k
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1
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1.0k
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kinexus antibody arrays
Cancer Cancer
16.4 years ago Richard Friedman ★ 2.0k
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1.3k
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Comment: C: LARGE Change in GCRMA expression values between versions (REPEAT QUESTION: PLEAS
16.5 years ago Richard Friedman ★ 2.0k
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4
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1.3k
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LARGE Change in GCRMA expression values between versions (REPEAT QUESTION: PLEASE REPLY)
Cancer gcrma Cancer gcrma
updated 16.5 years ago by ▴ 260 • written 16.5 years ago by ★ 2.0k
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0
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652
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GCRMA-induced correlations? LARGE Change in GCRMA expression values (REPEAT QUESTION)
Microarray Normalization Cancer gcrma Microarray Normalization Cancer gcrma
16.6 years ago Richard Friedman ★ 2.0k
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1
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705
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GCRMA-induced correlations? LARGE Change in GCRMA expression values
Microarray Normalization Cancer gcrma Microarray Normalization Cancer gcrma
updated 16.7 years ago by ★ 4.1k • written 16.7 years ago by ★ 2.0k
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4
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1.2k
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mouse4302.db vs mouse 4302
Annotation Cancer mouse4302 Annotation Cancer mouse4302
updated 16.8 years ago by ★ 7.2k • written 16.8 years ago by ★ 2.0k
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1
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1.1k
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Comment: C: mouse4302,db_2.0.2 in AffylmGUI
16.8 years ago Richard Friedman ★ 2.0k
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3
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1.1k
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mouse4302,db_2.0.2 in AffylmGUI
Annotation Cancer mouse4302 affy limma Annotation Cancer mouse4302 affy limma
updated 16.8 years ago by ▴ 450 • written 16.8 years ago by ★ 2.0k
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1
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826
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stability of gene lists with gcrma and limma upon changing the number of samples in the normalization
Cancer limma gcrma Cancer limma gcrma
updated 16.8 years ago by 21k • written 16.8 years ago by ★ 2.0k
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1
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1.4k
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Comment: C: Genefilter parameters for mouse 430 2
16.8 years ago Richard Friedman ★ 2.0k
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1
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1.4k
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Comment: C: Genefilter parameters for mouse 430 2
16.8 years ago Richard Friedman ★ 2.0k
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5
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1.4k
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Genefilter parameters for mouse 430 2
Cancer mouse4302 genefilter limma gcrma Cancer mouse4302 genefilter limma gcrma
updated 16.8 years ago by 67k • written 16.8 years ago by ★ 2.0k
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1
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1.2k
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Comment: C: GCRMA-induced correlations?
16.9 years ago Richard Friedman ★ 2.0k
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0
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1.3k
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Comment: C: R crashes after image array plots hgu133plus2 in R2.6.0
17.2 years ago Richard Friedman ★ 2.0k
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0
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1.3k
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Answer: A: R crashes after image array plots hgu133plus2 in R2.6.0
17.2 years ago Richard Friedman ★ 2.0k
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3
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1.3k
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R crashes after image array plots hgu133plus2 in R2.6.0
GUI hgu133plus2 affy limma affylmGUI GUI hgu133plus2 affy limma affylmGUI
updated 17.2 years ago by 25k • written 17.2 years ago by ★ 2.0k
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0
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845
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Affymetrix quality control metrics with simpleaffy
GO hgu133plus2 affy GO hgu133plus2 affy
17.3 years ago Richard Friedman ★ 2.0k
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0
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1.2k
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code for technical replicates in Limma with affy
Survival cdf annotate affy limma gcrma matchprobes affyio Survival cdf annotate affy
17.3 years ago Richard Friedman ★ 2.0k
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2
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1.0k
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affTableAnn error
hgu133a2 moe430a mouse430a2 cdf limma matchprobes hgu133a2 moe430a mouse430a2 cdf limma
updated 17.4 years ago by ★ 7.4k • written 17.4 years ago by ★ 2.0k
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2
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987
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RE : Re: question on limma package
limma limma
updated 17.5 years ago by ▴ 40 • written 17.5 years ago by ★ 2.0k
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2
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656
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Answer: A: question on limma package
17.5 years ago Richard Friedman ★ 2.0k
0
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2
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928
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Limma error message
Cancer limma Cancer limma
updated 17.8 years ago by ★ 7.4k • written 17.8 years ago by ★ 2.0k
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1
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408
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Answer: A: question about RefRMA (RefPlus)
17.9 years ago Richard Friedman ★ 2.0k
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0
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373
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2 questions on Normalzation with LIMMAGUI
18.2 years ago Richard Friedman ★ 2.0k
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0
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359
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Computing a diference of 2 differences from a CpG Island experiment using LimmaGUI
18.2 years ago Richard Friedman ★ 2.0k
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0
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1.2k
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Answer: A: Why "M" values?
18.3 years ago Richard Friedman ★ 2.0k
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0
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642
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Answer: A: GCRMA Bayes theory question
18.4 years ago Richard Friedman ★ 2.0k
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0
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1.4k
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Comment: C: [JOB] Bioinformatics positions at NCI
18.7 years ago Richard Friedman ★ 2.0k
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0
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1.1k
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Comment: C: base of B-value log in Limma - still not sure
18.7 years ago Richard Friedman ★ 2.0k
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0
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1.1k
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Answer: A: base of B-value log in Limma - still not sure
18.7 years ago Richard Friedman ★ 2.0k
0
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0
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813
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B value cutoff in LIMMA
Cancer limma Cancer limma
18.8 years ago Richard Friedman ★ 2.0k
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0
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1.1k
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Comment: C: GCRMA explained in words
19.0 years ago Richard Friedman ★ 2.0k
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3
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1.1k
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GCRMA explained in words
Cancer probe gcrma Cancer probe gcrma
updated 19.0 years ago by ▴ 200 • written 19.0 years ago by ★ 2.0k
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0
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919
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RMA - answer found- AND ANOTHER QUESTION
Cancer Cancer
19.0 years ago Richard Friedman ★ 2.0k
0
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1
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1.0k
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Answer: A: RMA - answer found
19.0 years ago Richard Friedman ★ 2.0k
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0
replies
1.2k
views
Answer: A: GCRMA
19.0 years ago Richard Friedman ★ 2.0k
200 results • Page 3 of 4
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