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Comment: Comment: DESeq2 - Differences between plotCounts and normalized counts
6 months ago Laia ▴ 10
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Comment: Comment: KEGG enrichment in R and gene IDs
13 months ago Laia ▴ 10
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2
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4.8k
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Comment: Comment: KEGG enrichment in R and gene IDs
13 months ago Laia ▴ 10
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Comment: Comment: KEGG enrichment in R and gene IDs
13 months ago Laia ▴ 10
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Comment: Comment: KEGG enrichment in R and gene IDs
13 months ago Laia ▴ 10
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4.8k
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Comment: Comment: KEGG enrichment in R and gene IDs
13 months ago Laia ▴ 10
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13
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KEGG enrichment in R and gene IDs
KEGG enrichKEGG R entrezid
13 months ago Laia ▴ 10
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Comment: Comment: KEGG enrichment in R and gene IDs
13 months ago Laia ▴ 10
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555
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DESeq2 with 2 continuous factors, LRT, coeficients and slope
DESeq2 LRT continuous coeficients
updated 15 months ago by 42k • written 15 months ago by ▴ 10
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684
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Log2FC in LRT vs Wald in multifactorial design
DESeq2 LRT multifactorial up/down-reg log2FC
updated 17 months ago by 65k • written 17 months ago by ▴ 10
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763
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Is it correct to plot Log2FC vs adj p-value from Likelihood ratio test?
DESeq2 adjp Volcano LRT
written 18 months ago by ▴ 10
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2.1k
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Comment: Comment: DESeq2 design multi factor
18 months ago Laia ▴ 10
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0
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606
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Answer: Answer: Downstream analysis with Differentially Expressed Genes
18 months ago Laia ▴ 10
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3
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945
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Interpretation of LRT results
DESeq2 LRT Heatmap
updated 7 months ago by 65k • written 18 months ago by ▴ 10
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Comment: Comment: DESeq2 design multi factor
18 months ago Laia ▴ 10
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13
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2.1k
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DESeq2 design multi factor
DESeq2 design 0substract nofullrank
updated 17 months ago by 42k • written 19 months ago by ▴ 10
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Answer: Answer: DESeq2 design multi factor
18 months ago Laia ▴ 10
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4
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1.6k
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plotCounts to visualize variations of a specific genes along conditions
DESeq2 plotCounts vst
updated 18 months ago by 42k • written 18 months ago by ▴ 10
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Comment: Comment: plotCounts to visualize variations of a specific genes along conditions
18 months ago Laia ▴ 10
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2.1k
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Comment: Comment: DESeq2 design multi factor
18 months ago Laia ▴ 10
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2.1k
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Comment: Comment: DESeq2 design multi factor
18 months ago Laia ▴ 10
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2.1k
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Comment: Comment: DESeq2 design multi factor
18 months ago Laia ▴ 10
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Comment: Comment: DESeq2 design multi factor
18 months ago Laia ▴ 10
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3.2k
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Answer: Answer: DESeq2 with two continuous variable in a design
19 months ago Laia ▴ 10
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