Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
1.0k
views
Answer: Answer: vst transformation and zero counts
23 months ago Michael Love 43k
0
votes
1
reply
2.9k
views
Comment: Comment: How to calculate p value when comparing two sets of DEGs and not applying intera
23 months ago Michael Love 43k
0
votes
1
reply
2.9k
views
Answer: Answer: How to calculate p value when comparing two sets of DEGs and not applying intera
23 months ago Michael Love 43k
0
votes
1
reply
2.9k
views
Comment: Comment: Normalizing Salmon output count data matrix using DESeq2
23 months ago Michael Love 43k
0
votes
1
reply
4.9k
views
Comment: Comment: DESeq2::sizeFactors() function does not output the sizeFactor table.
23 months ago Michael Love 43k
0
votes
1
reply
1.6k
views
Answer: Answer: utf-8 codec can't decode byte 0xd5
23 months ago Michael Love 43k
0
votes
0
replies
1.2k
views
Comment: Comment: DESeq2: Adjust for treatment effect patient vs control
23 months ago Michael Love 43k
0
votes
0
replies
1.2k
views
Comment: Comment: DESEQ2 Repeated Measures-like design error help
23 months ago Michael Love 43k
0
votes
1
reply
1.2k
views
Answer: Answer: DESeq2: Adjust for treatment effect patient vs control
23 months ago Michael Love 43k
0
votes
0
replies
2.1k
views
Answer: Answer: Pseudobulk-DESeq2 analyze multiple cell types at once?
23 months ago Michael Love 43k
0
votes
1
reply
1.4k
views
Answer: Answer: DESeq filtering specific to contrasts
23 months ago Michael Love 43k
0
votes
1
reply
889
views
Answer: Answer: help checking the design matrix and contrast in DESeq2 "not full rank" scenario
23 months ago Michael Love 43k
0
votes
0
replies
696
views
Answer: Answer: Double batch effect (Individuals nested within blocks in DESeq2)
23 months ago Michael Love 43k
1
vote
1
reply
1.0k
views
Answer: Answer: DESeq2 issue: can't create DESeq2 object
23 months ago Michael Love 43k
0
votes
1
reply
1.2k
views
Comment: Comment: DESEQ2 Repeated Measures-like design error help
23 months ago Michael Love 43k
0
votes
1
reply
1.2k
views
Answer: Answer: DESEQ2 Repeated Measures-like design error help
23 months ago Michael Love 43k
0
votes
0
replies
1.1k
views
Comment: Comment: DESeq2 interaction terms RIPseq analysis
23 months ago Michael Love 43k
0
votes
1
reply
1.1k
views
Answer: Answer: DESeq2 interaction terms RIPseq analysis
23 months ago Michael Love 43k
0
votes
1
reply
1.5k
views
Comment: Comment: DESeq2 aborting after upgrade
24 months ago Michael Love 43k
2
votes
0
replies
806
views
Answer: Answer: Continuous variable to identify responder genes using DESeq2
24 months ago Michael Love 43k
0
votes
0
replies
1.1k
views
Comment: Comment: LOG2FC DESEQ2
24 months ago Michael Love 43k
0
votes
0
replies
1.2k
views
Comment: Comment: Big differences between biological replicates makes DESeq2 result 0
24 months ago Michael Love 43k
0
votes
0
replies
455
views
Answer: Answer: unequal number of treatmets to control
24 months ago Michael Love 43k
0
votes
1
reply
1.1k
views
Answer: Answer: Batch effects removal across mRNA seq studies addressing different biological qu
24 months ago Michael Love 43k
1
vote
0
replies
883
views
Answer: Answer: PCA after DESeq2
24 months ago Michael Love 43k
0
votes
0
replies
958
views
Answer: Answer: DESeq2 lfcShrink drastic shrinkage
24 months ago Michael Love 43k
1
vote
1
reply
1.3k
views
Answer: Answer: DESeq2 analysis on time-series RNA experiment
24 months ago Michael Love 43k
0
votes
1
reply
1.5k
views
Answer: Answer: DESeq2 aborting after upgrade
24 months ago Michael Love 43k
1
vote
2
replies
1.2k
views
Answer: Answer: Big differences between biological replicates makes DESeq2 result 0
2.0 years ago Michael Love 43k
0
votes
1
reply
2.1k
views
Answer: Answer: Regressing out covariates from expression matrix for PCA visualization - can I u
2.0 years ago Michael Love 43k
0
votes
0
replies
1.1k
views
Comment: Comment: Interaction tests and paired interaction tests in swish
2.0 years ago Michael Love 43k
0
votes
1
reply
1.1k
views
Answer: Answer: Interaction tests and paired interaction tests in swish
2.0 years ago Michael Love 43k
0
votes
1
reply
895
views
Answer: Answer: Which fasta files to use for tximeta makeLinkTxome
2.0 years ago Michael Love 43k
0
votes
0
replies
555
views
Answer: Answer: DESEQ2 reduced model input into Pathfindr
2.0 years ago Michael Love 43k
0
votes
0
replies
822
views
Answer: Answer: Behavior of most genes in Ribosome-footprints dataset deviates from expected
2.0 years ago Michael Love 43k
0
votes
0
replies
1.1k
views
Answer: Answer: Deleting a column from data frame and then running DESeq2
2.0 years ago Michael Love 43k
0
votes
0
replies
1.1k
views
Comment: Comment: Deleting a column from data frame and then running DESeq2
2.0 years ago Michael Love 43k
0
votes
1
reply
2.1k
views
Answer: Answer: Plotting mean TPM of an expressed gene
2.0 years ago Michael Love 43k
0
votes
0
replies
929
views
Answer: Answer: Running Deseq2 with all samples vs samples for each comparison separately
2.0 years ago Michael Love 43k
0
votes
0
replies
2.9k
views
Comment: Comment: DESeq2 design with multiple factors
2.0 years ago Michael Love 43k
0
votes
0
replies
1.1k
views
Comment: Comment: DESeq2 multi-factor design and interaction terms
2.0 years ago Michael Love 43k
1
vote
1
reply
1.4k
views
Comment: Comment: distanceToNearest
2.0 years ago Michael Love 43k
0
votes
1
reply
2.9k
views
Answer: Answer: DESeq2 design with multiple factors
2.0 years ago Michael Love 43k
1
vote
0
replies
1.1k
views
Answer: Answer: DESeq2 Normalization for QC Samples
2.1 years ago Michael Love 43k
0
votes
0
replies
2.6k
views
Comment: Comment: Small RNA-seq Analysis DESEQ2 : Unexpected Significance
2.1 years ago Michael Love 43k
0
votes
0
replies
1.1k
views
Answer: Answer: DESeq2 interaction term + sva
2.1 years ago Michael Love 43k
0
votes
0
replies
919
views
Comment: Comment: DESeq2: Difference in DEG numbers when switching reference condition (numerator,
2.1 years ago Michael Love 43k
0
votes
1
reply
919
views
Answer: Answer: DESeq2: Difference in DEG numbers when switching reference condition (numerator,
2.1 years ago Michael Love 43k
0
votes
0
replies
1.9k
views
Answer: Answer: DESeq2 collinearity, adjusting for covariates, and the ground truth
2.1 years ago Michael Love 43k
0
votes
0
replies
1.3k
views
Comment: Comment: Different genes expression with limma
2.1 years ago Michael Love 43k
8,169 results • Page 8 of 164
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6