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4.4k
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Comment: C: Fitted values from EdgeR
7.4 years ago Aaron Lun ★ 29k
0
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2.7k
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Comment: C: Rhtslib fails to find liblzma.dylib on Mac OSX
7.5 years ago Aaron Lun ★ 29k
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0
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1.6k
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Answer: A: post hoc analysis on nested model
7.5 years ago Aaron Lun ★ 29k
0
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0
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3.6k
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Comment: C: Differential ChIP-Seq Analysis with DESeq2
7.5 years ago Aaron Lun ★ 29k
0
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0
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7.2k
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Comment: C: Up/Down Regulated GeneList from edgeR and R
7.5 years ago Aaron Lun ★ 29k
0
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1
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2.8k
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Comment: C: edger glmQLFit mix glmLRT
7.5 years ago Aaron Lun ★ 29k
0
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1
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7.2k
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Comment: C: Up/Down Regulated GeneList from edgeR and R
7.5 years ago Aaron Lun ★ 29k
1
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0
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5.0k
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Answer: A: topTable error: data.frame(logFC = M[top]) : row names contain missing values
7.5 years ago Aaron Lun ★ 29k
0
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1
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3.6k
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Comment: C: Differential ChIP-Seq Analysis with DESeq2
7.5 years ago Aaron Lun ★ 29k
1
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0
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1.2k
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Answer: A: Getting Significance for second factor (bioreplicate/subject) when using limma.
7.5 years ago Aaron Lun ★ 29k
0
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0
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3.9k
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Comment: C: edgeR: topTags
7.5 years ago Aaron Lun ★ 29k
0
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0
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668
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Comment: C: Normalize a gene using lib size from another matrix
7.5 years ago Aaron Lun ★ 29k
3
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3
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2.7k
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Rhtslib fails to find liblzma.dylib on Mac OSX
Rhtslib
updated 7.5 years ago by 16k • written 7.5 years ago by ★ 29k
0
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1
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2.8k
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Comment: C: paired two groups comparison using limma
7.5 years ago Aaron Lun ★ 29k
3
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1
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2.8k
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Answer: A: paired two groups comparison using limma
7.5 years ago Aaron Lun ★ 29k
0
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0
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1.9k
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Comment: C: Error when reading data with DropletUtils::read10xCounts
7.5 years ago Aaron Lun ★ 29k
2
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1
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1.9k
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Answer: A: Error when reading data with DropletUtils::read10xCounts
7.5 years ago Aaron Lun ★ 29k
0
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0
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2.0k
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Comment: C: CSAW Spike In Normalization: Error in .local(object, ...) : library sizes of
7.5 years ago Aaron Lun ★ 29k
0
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1
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2.0k
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Comment: C: CSAW Spike In Normalization: Error in .local(object, ...) : library sizes of
7.5 years ago Aaron Lun ★ 29k
0
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1
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1.8k
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Comment: C: Tximport of quasi-alignment-based RNAseq quantification (Salmon) for use with ed
7.5 years ago Aaron Lun ★ 29k
0
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2
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1.8k
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Comment: C: Tximport of quasi-alignment-based RNAseq quantification (Salmon) for use with ed
7.5 years ago Aaron Lun ★ 29k
2
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1
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1.8k
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Answer: A: Tximport of quasi-alignment-based RNAseq quantification (Salmon) for use with ed
7.5 years ago Aaron Lun ★ 29k
0
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1
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2.0k
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Answer: A: CSAW Spike In Normalization: Error in .local(object, ...) : library sizes of
7.5 years ago Aaron Lun ★ 29k
0
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0
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1.9k
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Comment: C: limma voom - time course experiment - multi level experiment
7.5 years ago Aaron Lun ★ 29k
1
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1
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1.9k
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Answer: A: limma voom - time course experiment - multi level experiment
7.5 years ago Aaron Lun ★ 29k
1
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1
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3.6k
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Comment: C: Differential ChIP-Seq Analysis with DESeq2
7.5 years ago Aaron Lun ★ 29k
1
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0
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5.2k
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Comment: C: Batch Correction with only one sample in a batch
7.5 years ago Aaron Lun ★ 29k
1
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1
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5.2k
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Comment: C: Batch Correction with only one sample in a batch
7.5 years ago Aaron Lun ★ 29k
2
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1
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2.3k
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Answer: A: single continuous factor
7.5 years ago Aaron Lun ★ 29k
0
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0
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4.5k
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Comment: C: markdown is coming to the support site
7.5 years ago Aaron Lun ★ 29k
0
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1
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1.4k
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Comment: C: edgeR and DESeq2
7.5 years ago Aaron Lun ★ 29k
2
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0
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1.9k
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Answer: A: CQN and EdgeR Library Size for Normalization
7.5 years ago Aaron Lun ★ 29k
0
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0
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1.8k
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Comment: C: Building contrasts for combined treatment groups to compare to a control
7.5 years ago Aaron Lun ★ 29k
1
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0
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4.1k
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Comment: C: Robust transformation of raw RNA-seq counts for exploratory data analysis and hi
7.5 years ago Aaron Lun ★ 29k
2
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0
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2.0k
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Answer: A: how to calculate the logFC value
7.5 years ago Aaron Lun ★ 29k
2
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3
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4.1k
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Answer: A: Robust transformation of raw RNA-seq counts for exploratory data analysis and hi
7.5 years ago Aaron Lun ★ 29k
0
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1
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1.6k
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Comment: C: Error message with Voom with blocked design matrix
7.5 years ago Aaron Lun ★ 29k
3
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2
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1.8k
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Answer: A: Building contrasts for combined treatment groups to compare to a control
7.5 years ago Aaron Lun ★ 29k
2
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1
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1.1k
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Answer: A: no replicates data
7.5 years ago Aaron Lun ★ 29k
0
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0
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1.4k
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Comment: C: Nested design in edgeR
7.5 years ago Aaron Lun ★ 29k
0
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1
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1.4k
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Comment: C: Nested design in edgeR
7.5 years ago Aaron Lun ★ 29k
0
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1
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5.9k
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Comment: C: Principle component analysis plot with gene expression data
7.5 years ago Aaron Lun ★ 29k
5
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1
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1.4k
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Answer: A: Nested design in edgeR
7.5 years ago Aaron Lun ★ 29k
1
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1
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5.9k
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Comment: C: Principle component analysis plot with gene expression data
7.5 years ago Aaron Lun ★ 29k
0
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0
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7.1k
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Comment: C: Filtering for ATAC-seq
7.5 years ago Aaron Lun ★ 29k
0
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1
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7.1k
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Comment: C: Filtering for ATAC-seq
7.6 years ago Aaron Lun ★ 29k
1
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0
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7.1k
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Comment: C: Filtering for ATAC-seq
7.6 years ago Aaron Lun ★ 29k
5
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1
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7.1k
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Answer: A: Filtering for ATAC-seq
7.6 years ago Aaron Lun ★ 29k
0
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0
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2.9k
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Comment: C: Using edgeR on pre-post treatment control design
7.6 years ago Aaron Lun ★ 29k
0
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0
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2.9k
views
Comment: C: Using edgeR on pre-post treatment control design
7.6 years ago Aaron Lun ★ 29k
2,880 results • Page 16 of 58
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