Bioconductor Rhtslib

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Rhts Rhtslib

2.7 years ago anand_mt ▴ 90

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Rhtslib installation error zlib

updated 4.2 years ago by leoadam014 • 0 • written 5.1 years ago by boboshaq • 0

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1.7k

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software error Rhtslib zlib.h

updated 4.2 years ago by Hervé Pagès 16k • written 4.2 years ago by juandenciso14 • 0

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1.9k

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biocLite package installation withr biocinstaller rhtslib

updated 5.3 years ago by Martin Morgan 25k • written 5.3 years ago by merv ▴ 100

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Rhtslib

updated 5.5 years ago by Hervé Pagès 16k • written 5.6 years ago by Aaron Lun ★ 28k

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1.1k

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diffhic csaw Rhtslib

updated 6.1 years ago by Martin Morgan 25k • written 6.1 years ago by favorov • 0

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1.8k

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Rhtslib htslib package

updated 6.3 years ago by Martin Morgan 25k • written 6.3 years ago by Shian Su ▴ 40

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Comment: Small RNA-seq Analysis DESEQ2 : Unexpected Significance by samer • 0

However, when examining the count plots, I've observed a frequent occurrence of significant adjusted p-values between conditions particular…

Comment: Small RNA-seq Analysis DESEQ2 : Unexpected Significance by samer • 0

I've conducted my DESeq2 analysis using the following code setup: dds <- DESeqDataSetFromMatrix(countData = data, colData = metadata, …

Comment: Can the limma package be applied to Log2 RUV-normalized data? by Shaimaa Gamal • 0

I see. Do you recommend a certain method to get norm.factors through calcNormFactors function espcially if the downstream analysis includes…

Comment: Can the limma package be applied to Log2 RUV-normalized data? by Gordon Smyth 49k

515 samples is certainly large enough.

Comment: Correct the batch effect in methylation analysis in R by kyj2226 • 0

Thank you for your kind response Gordon! :) Have a good time at the end of the year! Best, Yujin Kim

Votes

Comment: Can the limma package be applied to Log2 RUV-normalized data?

Answer: Correct the batch effect in methylation analysis in R

Comment: Why is DMRcate not available for Bioconductor version 3.18?

Answer: Correct the batch effect in methylation analysis in R

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Popular Question to Assa Yeroslaviz ★ 1.5k

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Popular Question to Frederik Ziebell ▴ 20