Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
578
views
DESeq2 TimeCourse with alpha and ihw and genes that change up to a certain timepoint
TimeCourse DESeq2 Manual
updated 21 months ago by 41k • written 21 months ago by ▴ 90
0
votes
1
reply
929
views
Comment: C: model design in rna seq - deseq2
4.7 years ago mat.lesche ▴ 90
0
votes
1
reply
1.1k
views
Comment: C: Splitting a dataset and control sample batch
5.2 years ago mat.lesche ▴ 90
0
votes
5
replies
1.1k
views
Splitting a dataset and control sample batch
deseq2 interactions batch effect correction grouping variable
updated 5.2 years ago by 41k • written 5.2 years ago by ▴ 90
0
votes
0
replies
1.1k
views
Comment: C: Splitting a dataset and control sample batch
5.2 years ago mat.lesche ▴ 90
0
votes
2
replies
1.8k
views
Comment: C: lfcShrink behavior with homogeneous expression dataset
5.4 years ago mat.lesche ▴ 90
5
votes
4
replies
1.8k
views
lfcShrink behavior with homogeneous expression dataset
deseq2 lfcshrink betaprior
updated 5.4 years ago by 41k • written 5.4 years ago by ▴ 90
0
votes
0
replies
5.2k
views
Comment: C: lfcShrink and factors with multiple levels
6.1 years ago mat.lesche ▴ 90
0
votes
1
reply
5.2k
views
Comment: C: lfcShrink and factors with multiple levels
6.1 years ago mat.lesche ▴ 90
2
votes
1
reply
5.2k
views
Comment: C: lfcShrink and factors with multiple levels
6.1 years ago mat.lesche ▴ 90
0
votes
1
reply
5.2k
views
Comment: C: lfcShrink and factors with multiple levels
6.1 years ago mat.lesche ▴ 90
0
votes
0
replies
5.2k
views
Comment: C: lfcShrink and factors with multiple levels
6.1 years ago mat.lesche ▴ 90
0
votes
1
reply
5.2k
views
Comment: C: lfcShrink and factors with multiple levels
6.1 years ago mat.lesche ▴ 90
3
votes
19
replies
5.2k
views
lfcShrink and factors with multiple levels
deseq2 lfcshrink relevel
updated 6.1 years ago by 41k • written 6.1 years ago by ▴ 90
0
votes
0
replies
5.2k
views
Comment: C: lfcShrink and factors with multiple levels
6.1 years ago mat.lesche ▴ 90
0
votes
1
reply
5.2k
views
Comment: C: lfcShrink and factors with multiple levels
6.1 years ago mat.lesche ▴ 90
0
votes
0
replies
2.7k
views
Comment: C: using paired end and single end data in featurecounts
6.3 years ago mat.lesche ▴ 90
0
votes
0
replies
1.7k
views
Comment: C: Finding the correct covariate for RNAseq experiment
6.3 years ago mat.lesche ▴ 90
1
vote
0
replies
6.7k
views
Comment: C: RNA STAR to DESeq2
6.3 years ago mat.lesche ▴ 90
1
vote
4
replies
1.7k
views
Finding the correct covariate for RNAseq experiment
deseq2 removebatcheffect() sva differential gene expression
updated 6.3 years ago by 41k • written 6.3 years ago by ▴ 90
0
votes
0
replies
1.7k
views
Comment: C: Finding the correct covariate for RNAseq experiment
6.3 years ago mat.lesche ▴ 90
0
votes
0
replies
1.1k
views
Comment: C: Increased number of total exons in DEXSeq
6.8 years ago mat.lesche ▴ 90
0
votes
1
reply
1.5k
views
Answer: A: dexseq doesn't identify exons as differential
6.8 years ago mat.lesche ▴ 90
0
votes
1
reply
1.3k
views
counting with htseq script in DEXSeq
DEXSeq dexseq_count htseq
6.8 years ago mat.lesche ▴ 90
0
votes
1
reply
2.2k
views
Comment: C: Grouping a multifactor design in DESeq2 and accouting for sex
7.2 years ago mat.lesche ▴ 90
0
votes
1
reply
2.2k
views
Comment: C: Grouping a multifactor design in DESeq2 and accouting for sex
7.2 years ago mat.lesche ▴ 90
0
votes
0
replies
2.2k
views
Comment: C: Grouping a multifactor design in DESeq2 and accouting for sex
7.2 years ago mat.lesche ▴ 90
0
votes
1
reply
2.2k
views
Comment: C: Grouping a multifactor design in DESeq2 and accouting for sex
7.2 years ago mat.lesche ▴ 90
0
votes
0
replies
2.2k
views
Comment: C: Grouping a multifactor design in DESeq2 and accouting for sex
7.2 years ago mat.lesche ▴ 90
0
votes
12
replies
2.2k
views
Grouping a multifactor design in DESeq2 and accouting for sex
deseq2 multiple factor design group
updated 7.2 years ago by 41k • written 7.2 years ago by ▴ 90
0
votes
0
replies
3.1k
views
Comment: C: junction.bed to GTF to use in DEXSeq
8.0 years ago mat.lesche ▴ 90
0
votes
0
replies
3.1k
views
Comment: C: junction.bed to GTF to use in DEXSeq
8.2 years ago mat.lesche ▴ 90
0
votes
2
replies
3.1k
views
Comment: C: junction.bed to GTF to use in DEXSeq
8.3 years ago mat.lesche ▴ 90
0
votes
1
reply
3.1k
views
Comment: C: junction.bed to GTF to use in DEXSeq
8.3 years ago mat.lesche ▴ 90
0
votes
0
replies
3.1k
views
Comment: C: junction.bed to GTF to use in DEXSeq
8.3 years ago mat.lesche ▴ 90
0
votes
1
reply
3.1k
views
Comment: C: junction.bed to GTF to use in DEXSeq
8.3 years ago mat.lesche ▴ 90
0
votes
0
replies
3.1k
views
Comment: C: junction.bed to GTF to use in DEXSeq
8.3 years ago mat.lesche ▴ 90
0
votes
0
replies
2.0k
views
Answer: A: DEXSeq on introns but exon overlap and error message
8.4 years ago mat.lesche ▴ 90
0
votes
3
replies
2.0k
views
DEXSeq on introns but exon overlap and error message
dexseq intron retention prepare annotation
8.4 years ago mat.lesche ▴ 90
0
votes
0
replies
2.0k
views
Comment: C: DEXSeq on introns but exon overlap and error message
8.4 years ago mat.lesche ▴ 90
0
votes
0
replies
2.1k
views
Comment: C: Design and independent filtering of patient RNA-seq data
8.5 years ago mat.lesche ▴ 90
0
votes
1
reply
2.1k
views
Comment: C: Design and independent filtering of patient RNA-seq data
8.5 years ago mat.lesche ▴ 90
0
votes
1
reply
2.1k
views
Comment: C: Design and independent filtering of patient RNA-seq data
8.5 years ago mat.lesche ▴ 90
0
votes
1
reply
2.1k
views
Comment: C: Design and independent filtering of patient RNA-seq data
8.5 years ago mat.lesche ▴ 90
0
votes
0
replies
5.2k
views
Comment: C: Rsubread::featureCounts extremely slow on some annotations
8.5 years ago mat.lesche ▴ 90
0
votes
0
replies
2.1k
views
Comment: C: Design and independent filtering of patient RNA-seq data
8.5 years ago mat.lesche ▴ 90
0
votes
1
reply
2.1k
views
Comment: C: Design and independent filtering of patient RNA-seq data
8.5 years ago mat.lesche ▴ 90
3
votes
13
replies
2.1k
views
Design and independent filtering of patient RNA-seq data
differential gene expression deseq2 design independent filtering limma
updated 8.5 years ago by 64k • written 8.5 years ago by ▴ 90
0
votes
1
reply
9.8k
views
Comment: C: DESeq2: multiple factors and comparison of a main factor between samples
8.7 years ago mat.lesche ▴ 90
2
votes
3
replies
9.8k
views
DESeq2: multiple factors and comparison of a main factor between samples
deseq2 multiple factor design
updated 8.7 years ago by 41k • written 8.7 years ago by ▴ 90
57 results • Page 1 of 2
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6