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Comment:
Comment: What should be the normalization protocol for RNA seq data for WGCNA?
15 months ago
sukeshinik5
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Comment:
Comment: What should be the normalization protocol for RNA seq data for WGCNA?
15 months ago
sukeshinik5
▴ 20
3
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What should be the normalization protocol for RNA seq data for WGCNA?
RNA_seqdata
Normalization_method
WGCNA
15 months ago
sukeshinik5
▴ 20
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Comment:
Comment: Batch adjustment for cohort based RNA seq data
16 months ago
sukeshinik5
▴ 20
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Batch adjustment for cohort based RNA seq data
RNASeqPower
removeBatchEffect
cpm
Batcheffect
16 months ago
sukeshinik5
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Comment:
Comment: Using both voom and removeBatchEffect, will they double adjust the data or is it
19 months ago
sukeshinik5
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Comment:
Comment: Using both voom and removeBatchEffect, will they double adjust the data or is it
updated 19 months ago by
Gordon Smyth
53k • written 19 months ago by
sukeshinik5
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1.8k
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Using both voom and removeBatchEffect, will they double adjust the data or is it the right way to perform this
limma
adjustment
voom
removeBatchEffect
covariates
19 months ago
sukeshinik5
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Comment:
Comment: Normalisation using clinical traits in RNA seq using DESeq2
20 months ago
sukeshinik5
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Normalisation using clinical traits in RNA seq using DESeq2
DESeq2
clinicaltraits
Normalization
batchnormalisation
20 months ago
sukeshinik5
▴ 20
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