Bioconductor RNAseq123

Showing : RNAseq123 • reset

vote

replies

212

views

RNAseq123

26 days ago • updated 12 days ago Lluís Revilla Sancho ▴ 730

vote

1.4k

views

RNAseq123

updated 3 months ago by difraiadomenico • 0 • written 3.2 years ago by demirkalecy ▴ 10

vote

353

views

RNASeqData RNAseq123

updated 5 months ago by ATpoint ★ 4.1k • written 5 months ago by kaurprab • 0

votes

replies

559

views

DESeq2 RNAseq123

15 months ago fatemeh.peimani • 0

votes

replies

864

views

DESeq2 RNAseq123 rnaseq deseq2 metatranscriptomic

updated 17 months ago by Michael Love 42k • written 17 months ago by irish.prg • 0

vote

replies

3.3k

views

RNAseq123

17 months ago afsanarupa1 • 0

votes

replies

1.0k

views

edgeR RNAseq123

updated 17 months ago by Gordon Smyth 50k • written 18 months ago by Istvan Albert ▴ 50

vote

replies

4.5k

views

RNAseq123

written 3.4 years ago by mmicky5050 • 0

votes

1.5k

views

RNAseq123 VariantFiltering Alignment VariantAnnotation

updated 18 months ago by James W. MacDonald 65k • written 18 months ago by Mohamed ▴ 30

vote

727

views

RNAseq ExperimentData RNAseq123 RNA ExperimentalDesign

updated 20 months ago by ATpoint ★ 4.1k • written 20 months ago by Mohamed ▴ 30

votes

replies

566

views

RNAseq123

22 months ago Mohamed ▴ 30

votes

1.0k

views

RNAseq123 Rna

updated 23 months ago by Gordon Smyth 50k • written 23 months ago by Mikołaj Mierzejewski • 0

votes

replies

2.5k

views

PCAtools edgeR pcaExplorer RNASeq RNAseq123

2.1 years ago Alan • 0

votes

825

views

snpeff python tophat r RNAseq123

updated 2.8 years ago by Kevin Blighe ★ 3.9k • written 2.8 years ago by kusum • 0

votes

replies

516

views

CircularRNA RNASeq RNAseq123

3.3 years ago rpokhre2 • 0

votes

replies

4.5k

views

voom htseq edgeR limma RNASeq123

updated 5.4 years ago by Gordon Smyth 50k • written 6.9 years ago by wd ▴ 30

16 results • Page 1 of 1

Recent ...

Replies

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by JKim • 0

The 1st model has an interaction term, but the 2nd model doesn't have the interaction term. That makes the difference.

Comment: Ensembl plants at annotationHub? by Daniele • 0

Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by swbarnes2 ★ 1.4k

If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?

Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0

The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…

Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80

ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …

Votes

Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

Awards • All

Popular Question to Vincent J. Carey, Jr. 6.7k

Popular Question to Koen Van den Berge ▴ 180