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following contributors:
9 years, 8 months ago
United States
How to find the amino acid codon corresponding to a translated genomic position
9 years, 8 months ago
United States
How to extract out wanted IntegerList more elegantly from nested list?
9 years, 8 months ago
United States
How to use GenomicRanges to find overlaps by percentage covered of interval
9 years, 8 months ago
United States
Operations across Lists of GenomicRanges?
9 years, 8 months ago
United States
Collapse/Reduce in GRanges by Metadata Column
9 years, 8 months ago
United States
How to get rid of "Update all/some/none? [a/s/n]:"
9 years, 8 months ago
United States
"rstudio initialization error: unable to connect to service" after logging in to the Master node's Rstudio Server's login page
9 years, 8 months ago
United States
heatmap.2() get matrix after hierarchical clustering
9 years, 8 months ago
WEHI, Melbourne, Australia
Differences between edgeR's and limma+voom's implementation of camera/roast/romer
9 years, 8 months ago
WEHI, Melbourne, Australia
seeking a paper or journal review about repeated multiple testing for Biological ChIP-seq replicates?
9 years, 8 months ago
WEHI, Melbourne, Australia
limma; Only fit list of certain genes/ filter eSet
9 years, 8 months ago
WEHI, Melbourne, Australia
Fit a multinomial to RNA-seq count data
9 years, 8 months ago
WEHI, Melbourne, Australia
Please share me your helpful comments with edgeR analysis without replicate
9 years, 8 months ago
WEHI, Melbourne, Australia
Confidence intervals on edgeR logFC
9 years, 8 months ago
WEHI, Melbourne, Australia
Differential expression of FPKM from RNA-seq data using limma and voom()
9 years, 8 months ago
WEHI, Melbourne, Australia
Using of limma moderated t-test with "corrected" expression matrix resulting from ComBat batch effect correction
9 years, 8 months ago
WEHI, Melbourne, Australia
limma-voom when testing differential expression of a subset of genes.
9 years, 8 months ago
WEHI, Melbourne, Australia
Trouble identifying differentially expressed genes on Affymetrix Human Gene 2.0.ST using R with oligo and limma package
9 years, 8 months ago
WEHI, Melbourne, Australia
Possible ways of performing differential gene expression and analysis of RNA-Seq data from normalized counts of RSEM software
9 years, 8 months ago
WEHI, Melbourne, Australia
Test whether expression levels of two gene sets are significantly different
9 years, 8 months ago
WEHI, Melbourne, Australia
how to use "non-standard" species for KEGG / GO analysis in limma?
9 years, 8 months ago
WEHI, Melbourne, Australia
modeling heteroscedasticity in limma-voom for RNA-Seq data analysis
9 years, 8 months ago
WEHI, Melbourne, Australia
Error when fitting linear model with technical replicates and blocking variable
9 years, 8 months ago
WEHI, Melbourne, Australia
Counting ambiguously mapped reads per feature
9 years, 8 months ago
WEHI, Melbourne, Australia
Normalization methodology in DESeq/DESeq2 vs edgeR
9 years, 8 months ago
WEHI, Melbourne, Australia
Appropriate ways to filter counts data for voom/limma
9 years, 8 months ago
WEHI, Melbourne, Australia
how to export data as excel file from plotSmear when using edgeR
9 years, 8 months ago
WEHI, Melbourne, Australia
Effect size similar to Cohen's d in limma
9 years, 8 months ago
WEHI, Melbourne, Australia
In limma's barcode plot, why are the cutoffs for the pale red and blue bands +/-sqrt(2)?
9 years, 8 months ago
WEHI, Melbourne, Australia
Is filtering necessary to extract significant DE genes with limma ?
9 years, 8 months ago
WEHI, Melbourne, Australia
Effects of continuous variable with adjustment for gender
9 years, 8 months ago
WEHI, Melbourne, Australia
Calculating a p value by permutation analysis
9 years, 8 months ago
Seattle, WA, United States
makeTxDbFromUCSC fails to download refLink table
9 years, 8 months ago
Seattle, WA, United States
Generating a proper TxDb instance from NCBI GFF Annotations File
9 years, 8 months ago
Seattle, WA, United States
XStringSet operations discard names - how to address?
9 years, 8 months ago
Seattle, WA, United States
how much positions overlapped for each pair of the pairs obtained by findoverlap.
9 years, 8 months ago
Seattle, WA, United States
overlapsAny for elements in GRangesList
9 years, 8 months ago
Seattle, WA, United States
pairwiseAlignments coordinate mapping?
9 years, 8 months ago
Seattle, WA, United States
Memory-efficient method to calculate GC content of millions of GRanges
9 years, 8 months ago
(Private Address)
parsing flowFrame@description in flowCore
9 years, 8 months ago
University of Padova
RUVseq PCA on raw data, whereas DESeq suggests stabilization
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