Question: Unable to run dmp <- dmpFinder() function with R 3.6
5 weeks ago by
hope2003 • 0
hope2003 • 0 wrote:
Hi, I am trying to run the following command for dmp. I have used the same function in R 3.5.3 and it was working fine. Now in R 3.6 it is giving me the following error: Any solution please ?
> Sample_Group <- pData(gset.funnorm)$Sample_Group > dmp <- dmpFinder(beta, pheno = Sample_Group , type = "categorical") Error in smooth.spline(lambda, vec.p0, w = ncs.weights, df = 3) : missing or infinite values in inputs are not allowed In addition: Warning messages: 1: Partial NA coefficients for 234 probe(s) 2: In pf(Fstat, df1, df2, lower.tail = FALSE) : NaNs produced
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