Prevent biocLite() from asking to update packages every time it's used
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jacorvar ▴ 40
@jacorvar-8972
Last seen 8 months ago
European Union

Dear BioC,

Every time I install a package with the biocLite() function, once the package has been installed, it asks me if I want to update all, some or none of the packages already installed.

I would appreciate if someone tells me a way to prevent that function from  asking it every time I use it.

Thanks a lot

bioclite package installation package updates • 793 views
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Any reason why you don't accept the updates? It is highly recommended that you accept them (by choosing the "all" option). That way you'll kill 2 birds with the same stone: biocLite() won't ask you again and you will keep your installation up to date.

H.

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@martin-morgan-1513
Last seen 10 weeks ago
United States

After library(BiocInstaller), see ?biocLite and suppressUpdates.

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Thanks Martin! It worked!