Showing : package updates • reset
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Installing DFP package
unable to update packages: foreign package updates
6.6 years ago shreyoshi.2311 • 0
1
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1
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1.2k
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News: DEADLINE: commits to Bioc 3.7
release bioconductor packages package updates News
7.0 years ago shepherl 4.1k
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News: List of Deprecated Packages for Bioc3.7
package updates deprecate release News
7.1 years ago shepherl 4.1k
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0
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1.1k
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News: List of Deprecated Packages for Bioc3.7
package updates deprecate News
7.2 years ago shepherl 4.1k
0
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1
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1.3k
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News: List of Deprecated Packages for Bioc3.7
package updates deprecate News
7.3 years ago shepherl 4.1k
0
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0
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1.3k
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News: List of Deprecated Packages for Bioc 3.7
deprecate news package updates News
7.4 years ago shepherl 4.1k
0
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4
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2.6k
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Biocgenerics updating problem on ubuntu 17.10
bioconductor biocgenerics ubuntu package updates r update
7.4 years ago siinemselvi • 0
1
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3
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2.3k
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Access to github repository- how does one know if their ssh public key was accepted
github package updates developers package development
7.6 years ago rtraborn • 0
1
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1
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1.3k
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Updating packages, Bioconductor 3.5: "package or namespace load failed for GO.db"
package updates
7.7 years ago gctromp ▴ 10
1
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2
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3.4k
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Corrupt Database Error When Loading qvalue() Package
qvalue library software error package installation package updates
8.4 years ago tah340 • 0
0
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2
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3.8k
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installation of package 'rmarkdown' had non-zero exit status
rmarkdown package updates
updated 8.7 years ago by 68k • written 8.7 years ago by ▴ 10
1
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2
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1.3k
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New package version submission
package submit package package updates
8.9 years ago francescodc87 • 0
0
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3
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1.5k
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Prevent biocLite() from asking to update packages every time it's used
bioclite package installation package updates
updated 9.0 years ago by 25k • written 9.0 years ago by ▴ 40
1
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1
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1.8k
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Error updating packages: couldn’t understand kern.osversion
package updates error
updated 9.7 years ago by ★ 8.2k • written 9.7 years ago by • 0
0
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4
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2.5k
views
update packages when installing a new package
bioclite package updates
updated 9.9 years ago by ★ 8.2k • written 9.9 years ago by ▴ 680
0
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6
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7.0k
views
Bioconductor 3.0 and old versions with R 3.2.0
package updates
9.9 years ago Cataphractus • 0
1
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13
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6.0k
views
'Codetools' and 'mgcv' packages fail to update
package updates codetools deseq mgcv
updated 10.1 years ago by • 0 • written 10.1 years ago by • 0
2
votes
2
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8.4k
views
biocLite() fails to update packages when main library not writable
bioclite package updates
updated 10.1 years ago by ★ 8.2k • written 10.1 years ago by ★ 2.0k
2
votes
2
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2.4k
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Anybody know if this will change: package ‘RMySQL’ is not available (for R version 3.1.2)
rmysql R version 3.1.2 3.1.2 package updates
10.4 years ago milorobertsmith • 0
19 results • Page 1 of 1
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Comment: Cannot extract size factor from DESeq2 analysis by s.malik • 0
Dear Mike, using tximeta and following code, is this fine to extract normalized counts after `sizeFactors(dds)` gives NULL? `dds <- DESeq…
Comment: Design formula for circadian time-course data for vst() function by Vishnu • 0
Thank you so much for your reply.
Comment: Analyzing TnSeq data with DESeq2 by Tom • 0
[Doncaster Locksmith][1] delivers trusted, efficient security services tailored to your needs. Analyzing TnSeq data with DESeq2 may uncover…
Answer: Design formula for circadian time-course data for vst() function by ATpoint ★ 4.8k
This was asked before: https://support.bioconductor.org/p/9148734/#9148812 Take-home message is that influence is minor, as you see your…
Comment: Filtering after DESeq by caroline.zanchi • 0
... I did it. It does filter out quite a bit of genes : ``` keep <- filterByExpr(dds, group="host_treatment_generation",min.count = 10, mi…
Votes
A: DESeq2::sizeFactors() function does not output the sizeFactor table.
Comment: Filtering after DESeq
A: Normalized counts from DESeq2 results in similar but not equal total read count?
A: DESeq2: Different Dispersions for different sample groups
A: Contrasts & coefficients in limma
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