Gene level methylation values
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ag1805x ▴ 50
@ag1805x-15215
Last seen 9 days ago
University of Allahabad

How to extract gene level methylation values?

I used Bismark to align BS-Seq data followed by methylKit for differential methylation identification. By default, the analysis considers CpG sites, but by using suitable annotation BED file, we can perform region level (promoters, exons, TSS) analysis. I was wondering how to obtain gene level methylation values?

methylation methylKit bsseq • 47 views
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