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The normalization options are not for normalizing the p-values, they are for normalizing the RNA-seq data that is input into NOISeq. This option is not needed for DESeq2 or edgeR because both methods already implement their own normalizations. In fact, TMM is the edgeR normalization method. So if you are following the DESeq2 or edgeR manuals, the p-values that you get from these methods should already be computed using the appropriate normalization.