Bioconductor P-value

Showing : p-value • reset

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265

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outputresult DEqMS sca.adj.pval error p-value

7 months ago Bastian • 0

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583

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one-sided nbinomWaldTest p-value meta-analysis DESeq2

updated 21 months ago by Michael Love 40k • written 21 months ago by nash12 • 0

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3.0k

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gwas genesis p-value q-q-plot

updated 2.3 years ago by Anna • 0 • written 3.5 years ago by solanum • 0

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1.3k

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p-value FDR DEP

updated 23 months ago by António Miguel de Jesus Domingues ▴ 490 • written 2.5 years ago by Alexei Leliavski ▴ 60

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792

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statistical significance p-value q-value FDR qvalue

3.4 years ago manozawa ▴ 10

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572

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ihw p-value multiple hypothesis

updated 4.0 years ago by Wolfgang Huber 13k • written 4.0 years ago by xiaotong.yao23 ▴ 10

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689

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edgeR FDR p-value Benjamini-Hochberg Differential Analysis

updated 4.3 years ago by Aaron Lun ★ 28k • written 4.3 years ago by ilovesuperheroes1993 • 0

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1.1k

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deseq2 p-value continuous deseq

4.3 years ago ariel ▴ 10

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1.6k

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DESeq2 nbinomWaldTest one-sided p-value

updated 4.8 years ago by Michael Love 40k • written 4.8 years ago by t.kuilman 170

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757

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weighted correlation network analysis WGCNA P-Value

4.8 years ago modarzi ▴ 10

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8.6k

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FDR p-value DESeq RNA-Seq

updated 5.5 years ago by Wade Davis ▴ 60 • written 6.1 years ago by yjiangnan ▴ 10

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734

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Gostats p-value

5.9 years ago salamandra ▴ 20

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1.1k

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deseq2 normalization p-value metaseq

updated 5.9 years ago by Ryan C. Thompson 7.8k • written 5.9 years ago by ed_isfahani • 0

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2.4k

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limma microarray fdr p-value results

updated 6.0 years ago by Aaron Lun ★ 28k • written 6.0 years ago by bhgyu ▴ 30

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1.7k

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diffbind p-value differential binding analysis fold enrichment values using diffbind

updated 7.0 years ago by Rory Stark ★ 4.9k • written 7.0 years ago by alisonhanh.nguyen • 0

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11k

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deseq differential gene expression statistics p-value

updated 2.3 years ago by Kai_Qi ▴ 20 • written 7.3 years ago by Giard ▴ 30

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3.5k

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p-value detection

updated 7.4 years ago by Gordon Smyth 47k • written 7.4 years ago by Eleni Christodoulou ▴ 150

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2.1k

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rankprod p-value

updated 8.0 years ago by James W. MacDonald 63k • written 8.0 years ago by brilladine • 0

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1.9k

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p-value medips MACS

updated 8.0 years ago by Lukas Chavez ▴ 570 • written 8.0 years ago by tptacek3050 • 0

19 results • Page 1 of 1

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Answer: multiple filters in biomaRt by RuBBiT0 ▴ 10

First, yes, one gene could be related to several GO ID, and the result is based on the annotation package you use. Second, could you pro…

Comment: Diffbind "No genome detected" by kyliecode • 0

Hi Dr. Stark, Thanks very much for your reply! The bam files were output from nf-core/chipseq pipeline and for some reason, they do not ha…

Answer: Discrepancy between DESeq2 files produced in Galaxy and R(RStudio) by Michael Love 40k

I guess that Galaxy may be using some kind of LFC shrinkage, but without seeing their code I wouldn't know for sure. Shrinkage generally…

Comment: TCGAbiolinks cannot find bcr_patient_barcode by Habil Zare ▴ 170

I checked your example with the devel version 2.29.6 on Bioc and it worked fine. Thanks for the fix!

Answer: error in ChAMP loading file by jenniferbrowngates • 0

I got a lot of information from this website about different topics which is beneficial for me too so I thank this site and also suggest a …

Votes

Answer: Using PEER to identify hidden confounders in RNA-seq data (not working)

Comment: Error: biomaRt has encountered an unexpected server error.

Comment: Interpret plot from DiffBind

Awards • All

Scholar to Tiago C. Silva ▴ 270