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157
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Goseq output with too many GO terms per category
go category goseq goterm written 6 months ago by Juan • 0 • updated 6 months ago by Gordon Smyth ♦ 36k
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1
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666
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1
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Getting Differentially Expressed Genes from GOSeq Categories
annotate biomart category goseq gene ontology written 20 months ago by krc3004 • 10 • updated 19 months ago by b.nota • 310
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2
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3.0k
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2
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goseq analysis - extracting list of my genes which are DE in the enriched GO category
go category goseq written 7.5 years ago by Helen Wright • 10 • updated 2.9 years ago by darshinimamindla • 10
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0
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676
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enrichment analysis for gene pairs
go gostats category gsea written 3.3 years ago by Hector Corrada Bravo • 60
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591
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hyperGTest for MSigDB categories
gostats category msigdb hypergeometric test written 3.6 years ago by petyuk • 70
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3
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820
views
3
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PFAM Enrichment in GOstats
gostats category pfam written 3.8 years ago by Iain Gallagher • 920 • updated 3.8 years ago by Guangchuang Yu • 1.1k
2
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1
answer
414
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1
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rownames for categoryReshape
category written 4.2 years ago by alison.sara.waller • 0 • updated 4.2 years ago by Martin Morgan ♦♦ 23k
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0
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597
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0
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how to fetch GO categories from Chinese hamster genome
go category goseq written 4.5 years ago by upendra kumar devisetty • 30
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1
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669
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GO enrichment
go category goseq written 4.5 years ago by Guest User • 12k
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1
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719
views
1
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snpStats reference allele used in genetic associations?
snp category snpstats written 4.8 years ago by Guest User • 12k • updated 4.8 years ago by Vincent J. Carey, Jr. ♦ 6.3k
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1.1k
views
0
answers
ComBat: 2 adjustment variables & continuous adjustment variables
go category sva written 4.9 years ago by Magda Price • 60
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1
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2.8k
views
1
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ComBat: 3 adjustment variables & continuous adjustment variables
go category sva written 4.9 years ago by Guest User • 12k • updated 4.9 years ago by Steve Lianoglou ♦ 12k
0
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0
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991
views
0
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ComBat: 2 adjustment variables & continuous adjustment variables
go category sva written 5.0 years ago by W. Evan Johnson • 790
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0
answers
944
views
0
answers
ComBat: 2 adjustment variables & continuous adjustment variables
go category sva written 5.0 years ago by Magda Price • 60
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votes
0
answers
855
views
0
answers
R pathview and mouse
category pathview written 5.1 years ago by Luo Weijun • 1.4k
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1
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1.0k
views
1
answer
Analysis of Affymetrix Human Gene 2.0 ST arrays
transcription annotation normalization go hgu133plus2 affy process category written 5.2 years ago by María Maqueda González • 20 • updated 5.2 years ago by Federico Lasa • 80
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1
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2.3k
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1
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Analysis of Affymetrix Human Gene 2.0 ST arrays
annotation normalization hgu133plus2 affy process category written 5.2 years ago by Guest User • 12k • updated 5.2 years ago by James W. MacDonald ♦ 49k
0
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1
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490
views
1
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GSEABase error parsing msigdb_v4.0.xml
category written 5.3 years ago by Milica Ng • 10 • updated 5.3 years ago by Martin Morgan ♦♦ 23k
0
votes
0
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607
views
0
answers
enrichment packages that accept t-stat (or related stat) as input
microarray limma category camera gsva written 5.3 years ago by Gordon Smyth ♦ 36k
0
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0
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503
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0
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enrichment packages that accept t-stat (or related stat) as input
microarray proteomics limma category camera gsva written 5.3 years ago by Pekka Kohonen • 190
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1
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424
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1
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Which package I should use
sequencing category written 5.4 years ago by Xiaoben Jiang • 10 • updated 5.4 years ago by Pet Chiang • 30
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1
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2.6k
views
1
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Simple pathway enrichment analysis for gene lists
microarray category gage keggrest rontotools written 5.5 years ago by enricoferrero • 570 • updated 5.5 years ago by Paul Shannon • 370
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1
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770
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1
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topGO analysis returns different gene counts for category than given for non-model organism
go category topgo written 5.5 years ago by Diana Toups Dugas • 20 • updated 5.5 years ago by Valerie Obenchain • 6.7k
0
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0
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607
views
0
answers
new window cairo bundle Re: [Rd] R/Sweave/cairo/freetype bug fix.
category beat written 5.7 years ago by Hin-Tak Leung • 30
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votes
0
answers
518
views
0
answers
Diff Bind consultation
category diffbind written 5.8 years ago by Rory Stark • 2.7k
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