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1
vote
1
answer
70
views
1
answer
Goseq output with too many GO terms per category
go category goseq goterm written 5 weeks ago by Juan • 0 • updated 5 weeks ago by Gordon Smyth ♦ 35k
0
votes
1
answer
484
views
1
answer
Getting Differentially Expressed Genes from GOSeq Categories
annotate biomart category goseq gene ontology written 15 months ago by krc3004 • 10 • updated 14 months ago by b.nota • 300
0
votes
2
answers
2.7k
views
2
answers
goseq analysis - extracting list of my genes which are DE in the enriched GO category
go category goseq written 7.0 years ago by Helen Wright • 10 • updated 2.5 years ago by darshinimamindla • 10
1
vote
0
answers
621
views
0
answers
enrichment analysis for gene pairs
go gostats category gsea written 2.9 years ago by Hector Corrada Bravo • 60
0
votes
0
answers
541
views
0
answers
hyperGTest for MSigDB categories
gostats category msigdb hypergeometric test written 3.1 years ago by petyuk • 70
0
votes
3
answers
729
views
3
answers
PFAM Enrichment in GOstats
gostats category pfam written 3.4 years ago by Iain Gallagher • 910 • updated 3.4 years ago by Guangchuang Yu • 1.0k
2
votes
1
answer
354
views
1
answer
rownames for categoryReshape
category written 3.8 years ago by alison.sara.waller • 0 • updated 3.8 years ago by Martin Morgan ♦♦ 22k
1
vote
0
answers
538
views
0
answers
how to fetch GO categories from Chinese hamster genome
go category goseq written 4.0 years ago by upendra kumar devisetty • 30
0
votes
1
answer
603
views
1
answer
GO enrichment
go category goseq written 4.1 years ago by Guest User • 12k
0
votes
1
answer
617
views
1
answer
snpStats reference allele used in genetic associations?
snp category snpstats written 4.3 years ago by Guest User • 12k • updated 4.3 years ago by Vincent J. Carey, Jr. ♦ 6.2k
0
votes
0
answers
998
views
0
answers
ComBat: 2 adjustment variables & continuous adjustment variables
go category sva written 4.5 years ago by Magda Price • 60
0
votes
1
answer
2.5k
views
1
answer
ComBat: 3 adjustment variables & continuous adjustment variables
go category sva written 4.5 years ago by Guest User • 12k • updated 4.5 years ago by Steve Lianoglou ♦ 12k
0
votes
0
answers
893
views
0
answers
ComBat: 2 adjustment variables & continuous adjustment variables
go category sva written 4.6 years ago by W. Evan Johnson • 760
0
votes
0
answers
886
views
0
answers
ComBat: 2 adjustment variables & continuous adjustment variables
go category sva written 4.6 years ago by Magda Price • 60
0
votes
0
answers
734
views
0
answers
R pathview and mouse
category pathview written 4.7 years ago by Luo Weijun • 1.4k
0
votes
1
answer
897
views
1
answer
Analysis of Affymetrix Human Gene 2.0 ST arrays
transcription annotation normalization go hgu133plus2 affy process category written 4.8 years ago by María Maqueda González • 20 • updated 4.8 years ago by Federico Lasa • 80
0
votes
1
answer
2.2k
views
1
answer
Analysis of Affymetrix Human Gene 2.0 ST arrays
annotation normalization hgu133plus2 affy process category written 4.8 years ago by Guest User • 12k • updated 4.8 years ago by James W. MacDonald ♦ 47k
0
votes
1
answer
427
views
1
answer
GSEABase error parsing msigdb_v4.0.xml
category written 4.9 years ago by Milica Ng • 10 • updated 4.9 years ago by Martin Morgan ♦♦ 22k
0
votes
0
answers
547
views
0
answers
enrichment packages that accept t-stat (or related stat) as input
microarray limma category camera gsva written 4.9 years ago by Gordon Smyth ♦ 35k
0
votes
0
answers
451
views
0
answers
enrichment packages that accept t-stat (or related stat) as input
microarray proteomics limma category camera gsva written 4.9 years ago by Pekka Kohonen • 190
0
votes
1
answer
374
views
1
answer
Which package I should use
sequencing category written 5.0 years ago by Xiaoben Jiang • 10 • updated 5.0 years ago by Pet Chiang • 30
0
votes
1
answer
2.2k
views
1
answer
Simple pathway enrichment analysis for gene lists
microarray category gage keggrest rontotools written 5.0 years ago by enricoferrero • 570 • updated 5.0 years ago by Paul Shannon • 360
0
votes
1
answer
693
views
1
answer
topGO analysis returns different gene counts for category than given for non-model organism
go category topgo written 5.1 years ago by Diana Toups Dugas • 20 • updated 5.1 years ago by Valerie Obenchain ♦♦ 6.6k
0
votes
0
answers
554
views
0
answers
new window cairo bundle Re: [Rd] R/Sweave/cairo/freetype bug fix.
category beat written 5.3 years ago by Hin-Tak Leung • 30
0
votes
0
answers
458
views
0
answers
Diff Bind consultation
category diffbind written 5.4 years ago by Rory Stark • 2.5k
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