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1
vote
1
answer
112
views
1
answer
Goseq output with too many GO terms per category
go category goseq goterm written 3 months ago by Juan • 0 • updated 3 months ago by Gordon Smyth ♦ 35k
0
votes
1
answer
584
views
1
answer
Getting Differentially Expressed Genes from GOSeq Categories
annotate biomart category goseq gene ontology written 17 months ago by krc3004 • 10 • updated 17 months ago by b.nota • 300
0
votes
2
answers
2.9k
views
2
answers
goseq analysis - extracting list of my genes which are DE in the enriched GO category
go category goseq written 7.3 years ago by Helen Wright • 10 • updated 2.7 years ago by darshinimamindla • 10
1
vote
0
answers
646
views
0
answers
enrichment analysis for gene pairs
go gostats category gsea written 3.1 years ago by Hector Corrada Bravo • 60
0
votes
0
answers
563
views
0
answers
hyperGTest for MSigDB categories
gostats category msigdb hypergeometric test written 3.4 years ago by petyuk • 70
0
votes
3
answers
782
views
3
answers
PFAM Enrichment in GOstats
gostats category pfam written 3.6 years ago by Iain Gallagher • 920 • updated 3.6 years ago by Guangchuang Yu • 1.1k
2
votes
1
answer
388
views
1
answer
rownames for categoryReshape
category written 4.0 years ago by alison.sara.waller • 0 • updated 4.0 years ago by Martin Morgan ♦♦ 22k
1
vote
0
answers
569
views
0
answers
how to fetch GO categories from Chinese hamster genome
go category goseq written 4.3 years ago by upendra kumar devisetty • 30
0
votes
1
answer
637
views
1
answer
GO enrichment
go category goseq written 4.3 years ago by Guest User • 12k
0
votes
1
answer
679
views
1
answer
snpStats reference allele used in genetic associations?
snp category snpstats written 4.6 years ago by Guest User • 12k • updated 4.6 years ago by Vincent J. Carey, Jr. ♦ 6.2k
0
votes
0
answers
1.0k
views
0
answers
ComBat: 2 adjustment variables & continuous adjustment variables
go category sva written 4.7 years ago by Magda Price • 60
0
votes
1
answer
2.7k
views
1
answer
ComBat: 3 adjustment variables & continuous adjustment variables
go category sva written 4.7 years ago by Guest User • 12k • updated 4.7 years ago by Steve Lianoglou ♦ 12k
0
votes
0
answers
947
views
0
answers
ComBat: 2 adjustment variables & continuous adjustment variables
go category sva written 4.8 years ago by W. Evan Johnson • 770
0
votes
0
answers
916
views
0
answers
ComBat: 2 adjustment variables & continuous adjustment variables
go category sva written 4.8 years ago by Magda Price • 60
0
votes
0
answers
808
views
0
answers
R pathview and mouse
category pathview written 4.9 years ago by Luo Weijun • 1.4k
0
votes
1
answer
962
views
1
answer
Analysis of Affymetrix Human Gene 2.0 ST arrays
transcription annotation normalization go hgu133plus2 affy process category written 5.0 years ago by María Maqueda González • 20 • updated 5.0 years ago by Federico Lasa • 80
0
votes
1
answer
2.3k
views
1
answer
Analysis of Affymetrix Human Gene 2.0 ST arrays
annotation normalization hgu133plus2 affy process category written 5.0 years ago by Guest User • 12k • updated 5.0 years ago by James W. MacDonald ♦ 48k
0
votes
1
answer
453
views
1
answer
GSEABase error parsing msigdb_v4.0.xml
category written 5.1 years ago by Milica Ng • 10 • updated 5.1 years ago by Martin Morgan ♦♦ 22k
0
votes
0
answers
573
views
0
answers
enrichment packages that accept t-stat (or related stat) as input
microarray limma category camera gsva written 5.1 years ago by Gordon Smyth ♦ 35k
0
votes
0
answers
477
views
0
answers
enrichment packages that accept t-stat (or related stat) as input
microarray proteomics limma category camera gsva written 5.1 years ago by Pekka Kohonen • 190
0
votes
1
answer
397
views
1
answer
Which package I should use
sequencing category written 5.2 years ago by Xiaoben Jiang • 10 • updated 5.2 years ago by Pet Chiang • 30
0
votes
1
answer
2.4k
views
1
answer
Simple pathway enrichment analysis for gene lists
microarray category gage keggrest rontotools written 5.3 years ago by enricoferrero • 570 • updated 5.3 years ago by Paul Shannon • 360
0
votes
1
answer
734
views
1
answer
topGO analysis returns different gene counts for category than given for non-model organism
go category topgo written 5.3 years ago by Diana Toups Dugas • 20 • updated 5.3 years ago by Valerie Obenchain ♦♦ 6.7k
0
votes
0
answers
580
views
0
answers
new window cairo bundle Re: [Rd] R/Sweave/cairo/freetype bug fix.
category beat written 5.5 years ago by Hin-Tak Leung • 30
0
votes
0
answers
493
views
0
answers
Diff Bind consultation
category diffbind written 5.6 years ago by Rory Stark • 2.6k
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