1
vote
1
answer
63
views
1
answer
csaw : effect of library size on filtering of uninteresting windows
csaw written 6 days ago by Vivek.b30 • updated 6 days ago by Aaron Lun14k
2
votes
1
answer
57
views
1
answer
Run windowCounts only on annotated regions?
csaw written 5 weeks ago by endrebak8510 • updated 5 weeks ago by Aaron Lun14k
2
votes
1
answer
142
views
1
answer
Hill in P-value distribution for heterogenous ChIP-seq samples
limma edger sva csaw qsmooth written 7 weeks ago by jma199110 • updated 7 weeks ago by Aaron Lun14k
3
votes
1
answer
147
views
1
answer
Differential Pol2 pausing analysis
chipseq edger csaw differential binding analysis written 7 weeks ago by dalerr0 • updated 7 weeks ago by Aaron Lun14k
3
votes
1
answer
113
views
1
answer
Use csaw to build matrix for heatmap?
chipseq edger csaw written 7 weeks ago by jmKeith0 • updated 7 weeks ago by Aaron Lun14k
3
votes
1
answer
125
views
1
answer
Interpretation of cross correlation plot to determine fragment length
chip-seq csaw histone written 10 weeks ago by siklenkak0 • updated 10 weeks ago by Aaron Lun14k
2
votes
1
answer
200
views
1
answer
Removing GC content bias and trended bias from ChIP-seq data
normalization edger cqn chip-seq csaw written 5 months ago by s14376430 • updated 5 months ago by Aaron Lun14k
2
votes
2
answers
173
views
2
answers
2
votes
1
answer
103
views
1
answer
csaw: removing PCR duplicates using dedup flag
csaw dedup written 5 months ago by asif.zubair0 • updated 5 months ago by James W. MacDonald42k
2
votes
1
answer
239
views
1
answer
csaw with negative controls
csaw written 8 months ago by chriad0
5
votes
1
answer
259
views
1
answer
1
vote
1
answer
398
views
1
answer
Normalization of chip-seq data in manually specified regions using CSAW
chip-seq csaw tmm tss written 10 months ago by saadmurtazakhan10 • updated 10 months ago by Aaron Lun14k
1
vote
1
answer
280
views
1
answer
csaw filterWindows function results in a warning: ("Zero library size detected.")
csaw written 10 months ago by chriad0 • updated 10 months ago by Aaron Lun14k
3
votes
1
answer
158
views
1
answer
window counts in csaw
counts csaw written 10 months ago by nobishvarghese0 • updated 10 months ago by Aaron Lun14k
2
votes
1
answer
160
views
1
answer
How does csaw handle multiply aligned reads?
chip-seq csaw written 10 months ago by endrebak8510 • updated 10 months ago by Aaron Lun14k
1
vote
1
answer
295
views
1
answer
1
vote
1
answer
145
views
1
answer
csaw: post clustering description of regions
csaw mergewindows written 10 months ago by asif.zubair0 • updated 10 months ago by Aaron Lun14k
2
votes
1
answer
147
views
1
answer
csaw: when not to dedup
csaw dedup written 10 months ago by asif.zubair0 • updated 10 months ago by Aaron Lun14k
3
votes
1
answer
161
views
1
answer
Detection of methylated regions from MeDIP data using csaw
csaw medip-chip written 11 months ago by nobishvarghese0 • updated 11 months ago by Aaron Lun14k
4
votes
1
answer
403
views
1
answer
2
votes
1
answer
187
views
1
answer
2
votes
1
answer
220
views
1
answer
Unexpected reversal in normalization factors from csaw
normalization csaw written 11 months ago by Ryan C. Thompson5.6k • updated 11 months ago by Aaron Lun14k
1
vote
1
answer
297
views
1
answer
2
votes
1
answer
279
views
1
answer
2
votes
4
answers
402
views
4
answers
CSAW: GAIN and LOSS of enrichment
csaw written 23 months ago by sergio.espeso-gil0 • updated 12 months ago by JoannaF0
<prev • 36 results • page 1 of 2 • next >

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.2.0
Traffic: 133 users visited in the last hour