0
votes
2
answers
1.2k
views
2
answers
Error while processing BAM file with Picard FixMateInformation
diffhic written 2.3 years ago by koustav.pal0 • updated 3 months ago by geryk.jan0
2
votes
1
answer
109
views
1
answer
Inflating interactionSets into a contact matrix
diffhic hic interactionset contactmatrix inflate written 3 months ago by hwick110 • updated 3 months ago by Aaron Lun18k
0
votes
0
answers
163
views
0
answers
csaw intallation issue: cannot find "lib" in Rhtslib installation
csaw diffhic rhtslib written 3 months ago by favorov0 • updated 3 months ago by Martin Morgan ♦♦ 21k
0
votes
1
answer
126
views
1
answer
How to get specific fragment/read interactions from HiC (diffHiC) data?
diffhic hic written 3 months ago by hwick110 • updated 3 months ago by Aaron Lun18k
0
votes
4
answers
173
views
4
answers
error running presplit_map.py
diffhic written 4 months ago by Eichan0
2
votes
2
answers
315
views
2
answers
2
votes
2
answers
198
views
2
answers
0
votes
1
answer
129
views
1
answer
0
votes
1
answer
239
views
1
answer
min enrichment in peak calling with diffHiC?
diffhic peak written 9 months ago by hwick110 • updated 9 months ago by Aaron Lun18k
1
vote
1
answer
261
views
1
answer
diffHiC with no biological replicates?
deseq glm diffhic estimate dispersion value no replicates written 10 months ago by hwick110 • updated 10 months ago by Aaron Lun18k
0
votes
1
answer
270
views
1
answer
diffHic count data
diffhic written 12 months ago by kamal.fartiyal8410 • updated 12 months ago by Aaron Lun18k
2
votes
1
answer
229
views
1
answer
diffHic: minimum counts per bin
edger diffhic written 14 months ago by andreucat910
5
votes
2
answers
468
views
2
answers
1
vote
1
answer
261
views
1
answer
Removing trended biases between HiC libraries
diffhic written 15 months ago by Darya Vanichkina90 • updated 15 months ago by Aaron Lun18k
1
vote
1
answer
241
views
1
answer
Interpreting strand orientation plots in diffHic
diffhic written 15 months ago by Darya Vanichkina90 • updated 15 months ago by Aaron Lun18k
1
vote
1
answer
287
views
1
answer
Problem in finding NB dispersion for my HiC datasets
diffhic written 16 months ago by manjulathimma0 • updated 16 months ago by James W. MacDonald45k
0
votes
2
answers
225
views
2
answers
Error in plotDI in pacakge diffHic
diffhic plotdi written 17 months ago by Andrew0
0
votes
1
answer
246
views
1
answer
How to run plotPlaid in diffHic Package using output from hic Pro
diffhic plotplaid written 17 months ago by Andrew0 • updated 17 months ago by Aaron Lun18k
1
vote
3
answers
319
views
3
answers
0
votes
2
answers
257
views
2
answers
1
vote
2
answers
314
views
2
answers
1
vote
1
answer
316
views
1
answer
0
votes
2
answers
317
views
2
answers
diffHic: alternative input?
diffhic written 19 months ago by chiara.a.nicoletti0
0
votes
1
answer
245
views
1
answer
diffHic preparePairs function
diffhic written 19 months ago by lwtan900 • updated 19 months ago by Aaron Lun18k
0
votes
1
answer
294
views
1
answer
diffHiC: Error when call preparePairs
diffhic written 19 months ago by tolemac0 • updated 19 months ago by Aaron Lun18k
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