Showing: diffhicreset
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diffHiC error in mergePairs.
diffhic rdhf5 written 11 weeks ago by kaivalya.shevade0 • updated 11 weeks ago by Aaron Lun25k
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conda install of diffHic
diffhic conda written 4 months ago by smithgr0 • updated 4 months ago by Aaron Lun25k
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123
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Error while running normOffsets in diffhic
csaw diffhic written 4 months ago by shopnil990 • updated 4 months ago by Aaron Lun25k
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121
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diffHic ICE normalization PCA with NAs
normalization pca diffhic hi-c nas written 8 months ago by inzirio10 • updated 8 months ago by Aaron Lun25k
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from denove contig assembly to chromosome bins
gothic diffhic hic hic-c hicup written 12 months ago by mictadlo0 • updated 12 months ago by Aaron Lun25k
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195
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208
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Pre-processing for diffHiC
diffhic written 13 months ago by James W. MacDonald52k • updated 13 months ago by Aaron Lun25k
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246
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extract HiC contacts for a given BEDPE set of coordinates
chromatin diffhic hic bedpe written 15 months ago by gryderart0 • updated 15 months ago by Aaron Lun25k
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Error while processing BAM file with Picard FixMateInformation
diffhic written 4.1 years ago by koustav.pal0 • updated 2.1 years ago by geryk.jan0
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378
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Inflating interactionSets into a contact matrix
diffhic hic interactionset contactmatrix inflate written 2.1 years ago by hwick120 • updated 2.1 years ago by Aaron Lun25k
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csaw intallation issue: cannot find "lib" in Rhtslib installation
csaw diffhic rhtslib written 2.1 years ago by favorov0 • updated 2.1 years ago by Martin Morgan ♦♦ 24k
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How to get specific fragment/read interactions from HiC (diffHiC) data?
diffhic hic written 2.1 years ago by hwick120 • updated 2.1 years ago by Aaron Lun25k
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error running presplit_map.py
diffhic written 2.2 years ago by Eichan0
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345
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539
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min enrichment in peak calling with diffHiC?
diffhic peak written 2.6 years ago by hwick120 • updated 2.6 years ago by Aaron Lun25k
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611
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diffHiC with no biological replicates?
deseq glm diffhic estimate dispersion value no replicates written 2.7 years ago by hwick120 • updated 2.7 years ago by Aaron Lun25k
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520
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diffHic count data
diffhic written 2.9 years ago by kamal.fartiyal8410 • updated 2.9 years ago by Aaron Lun25k
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diffHic: minimum counts per bin
edger diffhic written 3.0 years ago by andreucat910
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Removing trended biases between HiC libraries
diffhic written 3.1 years ago by Darya Vanichkina110 • updated 3.1 years ago by Aaron Lun25k
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