0
votes
2
answers
1.0k
views
2
answers
Error while processing BAM file with Picard FixMateInformation
diffhic written 2.1 years ago by koustav.pal0 • updated 1 day ago by geryk.jan0
2
votes
1
answer
68
views
1
answer
Inflating interactionSets into a contact matrix
diffhic hic interactionset contactmatrix inflate written 20 days ago by hwick110 • updated 20 days ago by Aaron Lun17k
0
votes
0
answers
107
views
0
answers
csaw intallation issue: cannot find "lib" in Rhtslib installation
csaw diffhic rhtslib written 26 days ago by favorov0 • updated 25 days ago by Martin Morgan ♦♦ 20k
0
votes
1
answer
93
views
1
answer
How to get specific fragment/read interactions from HiC (diffHiC) data?
diffhic hic written 28 days ago by hwick110 • updated 28 days ago by Aaron Lun17k
0
votes
4
answers
112
views
4
answers
error running presplit_map.py
diffhic written 5 weeks ago by Eichan0
2
votes
2
answers
293
views
2
answers
2
votes
2
answers
151
views
2
answers
0
votes
1
answer
111
views
1
answer
0
votes
1
answer
203
views
1
answer
min enrichment in peak calling with diffHiC?
diffhic peak written 6 months ago by hwick110 • updated 6 months ago by Aaron Lun17k
1
vote
1
answer
211
views
1
answer
diffHiC with no biological replicates?
deseq glm diffhic estimate dispersion value no replicates written 7 months ago by hwick110 • updated 7 months ago by Aaron Lun17k
0
votes
1
answer
242
views
1
answer
diffHic count data
diffhic written 9 months ago by kamal.fartiyal8410 • updated 9 months ago by Aaron Lun17k
2
votes
1
answer
202
views
1
answer
diffHic: minimum counts per bin
edger diffhic written 11 months ago by andreucat910
5
votes
2
answers
365
views
2
answers
1
vote
1
answer
238
views
1
answer
Removing trended biases between HiC libraries
diffhic written 12 months ago by Darya Vanichkina90 • updated 12 months ago by Aaron Lun17k
1
vote
1
answer
209
views
1
answer
Interpreting strand orientation plots in diffHic
diffhic written 12 months ago by Darya Vanichkina90 • updated 12 months ago by Aaron Lun17k
1
vote
1
answer
236
views
1
answer
Problem in finding NB dispersion for my HiC datasets
diffhic written 13 months ago by manjulathimma0 • updated 13 months ago by James W. MacDonald45k
0
votes
2
answers
203
views
2
answers
Error in plotDI in pacakge diffHic
diffhic plotdi written 14 months ago by Andrew0
0
votes
1
answer
221
views
1
answer
How to run plotPlaid in diffHic Package using output from hic Pro
diffhic plotplaid written 14 months ago by Andrew0 • updated 14 months ago by Aaron Lun17k
1
vote
3
answers
288
views
3
answers
0
votes
2
answers
239
views
2
answers
1
vote
2
answers
283
views
2
answers
1
vote
1
answer
284
views
1
answer
0
votes
2
answers
288
views
2
answers
diffHic: alternative input?
diffhic written 16 months ago by chiara.a.nicoletti0
0
votes
1
answer
212
views
1
answer
diffHic preparePairs function
diffhic written 16 months ago by lwtan900 • updated 16 months ago by Aaron Lun17k
0
votes
1
answer
274
views
1
answer
diffHiC: Error when call preparePairs
diffhic written 16 months ago by tolemac0 • updated 16 months ago by Aaron Lun17k
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