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2
votes
1
answer
94
views
1
answer
Error in VCF parsing with VariantAnnotation
variantannotation ensemblvep software error written 6 weeks ago by mumichae • 20 • updated 5 weeks ago by Valerie Obenchain • 6.7k
2
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1
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135
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1
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ensemblVEP: "Ensembl VEP is not installed in your path."
ensemblvep software error written 6 weeks ago by patrick.turko • 10 • updated 6 weeks ago by Martin Morgan ♦♦ 23k
0
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1
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248
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1
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ensemblVEP supported versions, and troubleshooting
ensemblvep written 13 months ago by Janet Young • 730 • updated 13 months ago by shepherl ♦♦ 1.3k
0
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0
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406
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error using ensemblVEP v88 when querying rs67418256 with basic(param_vep)$everything=TRUE
ensemblvep written 23 months ago by mlrubio • 0
0
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0
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569
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problem using ensemblVEP with GRC37
ensemblvep grch37 written 23 months ago by mikko.arvas • 0
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0
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304
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0
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ensemblVEP problem with MySQL database
ensemblvep written 2.7 years ago by clairelsimpson • 10
2
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1
answer
450
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1
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parseCSQToGRanges() : mcols are all factors, despite some numeric fields
ensemblvep written 3.0 years ago by kevin.rue • 220 • updated 3.0 years ago by Martin Morgan ♦♦ 23k
2
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1.3k
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1
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ensemblVEP support for Ensembl API version 78
ensemblvep written 4.3 years ago by Moiz Bootwalla • 50 • updated 4.3 years ago by Valerie Obenchain • 6.7k
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1.2k
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ensemblVEP, variant_effect_predictor versions and release schedule
transcription hapmap polyphen sift convert genomes ensemblvep written 5.3 years ago by Thomas Sandmann • 30 • updated 5.3 years ago by Valerie Obenchain • 6.7k
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558
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ensemblVEP, variant_effect_predictor versions and release schedule
cancer mlinterfaces bridge ensemblvep annotationhub written 5.3 years ago by Valerie Obenchain • 6.7k
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0
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489
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zero-row result breaks select() on PolyPhen.Hsapiens.* and SIFT.Hsapiens.*
variantannotation annotation polyphen sift annotate ensemblvep written 5.4 years ago by Valerie Obenchain • 6.7k
0
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1
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651
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ensemblVEP, variant_effect_predictor versions and release schedule
ensemblvep written 5.6 years ago by Guest User • 12k • updated 5.6 years ago by Valerie Obenchain • 6.7k
0
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916
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ensemblVEP: passing on coverage / frequency information
coverage varianttools ensemblvep written 6.0 years ago by Guest User • 12k • updated 6.0 years ago by Valerie Obenchain • 6.7k
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