2
votes
1
answer
94
views
1
answer
NGS with summarizeOverlaps and SAM files
genomicalignments written 10 days ago by sergiogalvezrojas0 • updated 9 days ago by James W. MacDonald43k
2
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1
answer
74
views
1
answer
0
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0
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90
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0
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3
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1
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118
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1
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How are duplicates determined with readGAlignments/scanBam?
rsamtools genomicalignments written 12 weeks ago by jfiksel10 • updated 12 weeks ago by Mike Smith1.7k
0
votes
1
answer
115
views
1
answer
2
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1
answer
129
views
1
answer
Integer overflow when tabulating read coverage
genomicranges genomicalignments written 3 months ago by jma199120 • updated 3 months ago by Michael Lawrence9.2k
0
votes
0
answers
162
views
0
answers
0
votes
1
answer
163
views
1
answer
genomicAlignments: fail to run readGAlignments example code
genomicalignments written 4 months ago by Ariel Chernomoretz160 • updated 4 months ago by Valerie Obenchain ♦♦ 6.1k
2
votes
1
answer
199
views
1
answer
1
vote
0
answers
163
views
0
answers
1
vote
1
answer
133
views
1
answer
2
votes
1
answer
167
views
1
answer
2
votes
2
answers
162
views
2
answers
3
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1
answer
235
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1
answer
findSpliceOverlaps Buffer Error
genomicalignments findspliceoverlaps written 6 months ago by Dario Strbenac1.3k • updated 6 months ago by Hervé Pagès ♦♦ 12k
1
vote
2
answers
146
views
2
answers
2
votes
1
answer
127
views
1
answer
Class for Storing Chimeric Reads
genomicalignments chimeric written 6 months ago by Dario Strbenac1.3k • updated 6 months ago by Valerie Obenchain ♦♦ 6.1k
2
votes
1
answer
212
views
1
answer
2
votes
1
answer
159
views
1
answer
RNAseq workflow exception with Rsamtools
rsamtools genomicalignments written 8 months ago by jmlCT10 • updated 8 months ago by Mike Smith1.7k
0
votes
1
answer
212
views
1
answer
8
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2
answers
193
views
2
answers
Counting ambiguously mapped reads per feature
rnaseq genomicranges rsamtools genomicalignments bam written 10 months ago by rubi70 • updated 10 months ago by Gordon Smyth30k
0
votes
1
answer
162
views
1
answer
Views with RleLists and IRangesLists
coverage genomicalignments views irangeslist rlelist written 10 months ago by ccanchaya0 • updated 10 months ago by Hervé Pagès ♦♦ 12k
3
votes
1
answer
228
views
1
answer
1
vote
1
answer
220
views
1
answer
slow granges in GAlignmentPairs
genomicalignments written 12 months ago by Arne Muller20 • updated 11 months ago by Hervé Pagès ♦♦ 12k
1
vote
0
answers
178
views
0
answers
2
votes
1
answer
401
views
1
answer
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