3
votes
1
answer
79
views
1
answer
How are duplicates determined with readGAlignments/scanBam?
rsamtools genomicalignments written 22 days ago by jfiksel10 • updated 22 days ago by Mike Smith1.5k
0
votes
1
answer
74
views
1
answer
2
votes
1
answer
88
views
1
answer
Integer overflow when tabulating read coverage
genomicranges genomicalignments written 7 weeks ago by jma199110 • updated 7 weeks ago by Michael Lawrence9.0k
0
votes
0
answers
120
views
0
answers
0
votes
1
answer
122
views
1
answer
genomicAlignments: fail to run readGAlignments example code
genomicalignments written 10 weeks ago by Ariel Chernomoretz160 • updated 9 weeks ago by Valerie Obenchain ♦♦ 5.9k
2
votes
1
answer
159
views
1
answer
1
vote
0
answers
129
views
0
answers
1
vote
1
answer
105
views
1
answer
2
votes
1
answer
135
views
1
answer
2
votes
2
answers
120
views
2
answers
3
votes
1
answer
195
views
1
answer
findSpliceOverlaps Buffer Error
genomicalignments findspliceoverlaps written 4 months ago by Dario Strbenac1.3k • updated 4 months ago by Hervé Pagès ♦♦ 12k
1
vote
2
answers
117
views
2
answers
2
votes
1
answer
100
views
1
answer
Class for Storing Chimeric Reads
genomicalignments chimeric written 4 months ago by Dario Strbenac1.3k • updated 4 months ago by Valerie Obenchain ♦♦ 5.9k
2
votes
1
answer
173
views
1
answer
2
votes
1
answer
120
views
1
answer
RNAseq workflow exception with Rsamtools
rsamtools genomicalignments written 6 months ago by jmlCT10 • updated 6 months ago by Mike Smith1.5k
0
votes
1
answer
183
views
1
answer
8
votes
2
answers
165
views
2
answers
Counting ambiguously mapped reads per feature
rnaseq genomicranges rsamtools genomicalignments bam written 8 months ago by rubi60 • updated 8 months ago by Gordon Smyth30k
0
votes
1
answer
134
views
1
answer
Views with RleLists and IRangesLists
coverage genomicalignments views irangeslist rlelist written 8 months ago by ccanchaya0 • updated 8 months ago by Hervé Pagès ♦♦ 12k
3
votes
1
answer
192
views
1
answer
1
vote
1
answer
195
views
1
answer
slow granges in GAlignmentPairs
genomicalignments written 9 months ago by Arne Muller10 • updated 9 months ago by Hervé Pagès ♦♦ 12k
1
vote
0
answers
147
views
0
answers
2
votes
1
answer
325
views
1
answer
0
votes
1
answer
142
views
1
answer
queryLoc2refLoc not implemented?
genomicalignments written 11 months ago by florence_craye20 • updated 11 months ago by Steve Lianoglou12k
0
votes
1
answer
271
views
1
answer
Question about the function "summarizeOverlaps"
genomicalignments summarizeoverlaps written 13 months ago by myf37480 • updated 13 months ago by Michael Love11k
1
vote
1
answer
385
views
1
answer
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