5
votes
1
answer
86
views
1
answer
2
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1
answer
129
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1
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NGS with summarizeOverlaps and SAM files
genomicalignments written 10 weeks ago by sergiogalvezrojas0 • updated 9 weeks ago by James W. MacDonald43k
2
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1
answer
121
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1
answer
0
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0
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120
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0
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3
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1
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146
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1
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How are duplicates determined with readGAlignments/scanBam?
rsamtools genomicalignments written 4 months ago by jfiksel20 • updated 4 months ago by Mike Smith1.9k
0
votes
1
answer
152
views
1
answer
2
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1
answer
172
views
1
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Integer overflow when tabulating read coverage
genomicranges genomicalignments written 5 months ago by jma199120 • updated 5 months ago by Michael Lawrence9.3k
0
votes
0
answers
205
views
0
answers
0
votes
1
answer
208
views
1
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genomicAlignments: fail to run readGAlignments example code
genomicalignments written 6 months ago by Ariel Chernomoretz160 • updated 6 months ago by Valerie Obenchain ♦♦ 6.2k
2
votes
1
answer
245
views
1
answer
1
vote
0
answers
195
views
0
answers
1
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1
answer
157
views
1
answer
2
votes
1
answer
208
views
1
answer
2
votes
2
answers
205
views
2
answers
3
votes
1
answer
275
views
1
answer
findSpliceOverlaps Buffer Error
genomicalignments findspliceoverlaps written 8 months ago by Dario Strbenac1.3k • updated 8 months ago by Hervé Pagès ♦♦ 12k
1
vote
2
answers
177
views
2
answers
2
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1
answer
158
views
1
answer
Class for Storing Chimeric Reads
genomicalignments chimeric written 8 months ago by Dario Strbenac1.3k • updated 8 months ago by Valerie Obenchain ♦♦ 6.2k
2
votes
1
answer
248
views
1
answer
2
votes
1
answer
198
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1
answer
RNAseq workflow exception with Rsamtools
rsamtools genomicalignments written 10 months ago by jmlCT10 • updated 10 months ago by Mike Smith1.9k
0
votes
1
answer
252
views
1
answer
8
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2
answers
233
views
2
answers
Counting ambiguously mapped reads per feature
rnaseq genomicranges rsamtools genomicalignments bam written 12 months ago by rubi70 • updated 12 months ago by Gordon Smyth30k
0
votes
1
answer
192
views
1
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Views with RleLists and IRangesLists
coverage genomicalignments views irangeslist rlelist written 12 months ago by ccanchaya0 • updated 12 months ago by Hervé Pagès ♦♦ 12k
4
votes
1
answer
276
views
1
answer
1
vote
1
answer
251
views
1
answer
slow granges in GAlignmentPairs
genomicalignments written 14 months ago by Arne Muller20 • updated 13 months ago by Hervé Pagès ♦♦ 12k
1
vote
0
answers
211
views
0
answers
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