Showing: genomicalignmentsreset
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indexBam(), summarizeOverlaps() error: RNA-seq
rsamtools genomicalignments rna-seq written 4 weeks ago by mat14940 • updated 4 weeks ago by Mike Smith3.3k
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Efficient counting of nucleotide changes in short-reads
biostrings genomicalignments written 3 months ago by Robert Castelo2.3k • updated 3 months ago by Michael Lawrence10k
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Subset bam file in R
genomicranges rsamtools genomicalignments written 3 months ago by ferbecneu0 • updated 3 months ago by Michael Lawrence10k
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How to parse supplementary (not secondary) alignments
rsamtools genomicalignments written 7 months ago by marco10 • updated 7 months ago by Martin Morgan ♦♦ 23k
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FDR adjustment in Time-Course DATA DESEQ2
deseq2 genomicalignments fdrtool written 17 months ago by jakob.petereit20 • updated 17 months ago by Michael Love22k
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NGS with summarizeOverlaps and SAM files
genomicalignments written 22 months ago by sergiogalvezrojas0 • updated 22 months ago by James W. MacDonald49k
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How are duplicates determined with readGAlignments/scanBam?
rsamtools genomicalignments written 2.1 years ago by jfiksel30 • updated 2.1 years ago by Mike Smith3.3k
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Integer overflow when tabulating read coverage
genomicranges genomicalignments written 2.1 years ago by jma199130 • updated 2.1 years ago by Michael Lawrence10k
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genomicAlignments: fail to run readGAlignments example code
genomicalignments written 2.2 years ago by Ariel Chernomoretz160 • updated 2.2 years ago by Valerie Obenchain6.7k
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