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1
answer
60
views
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error in GenomicFeature
genomicfeatures written 4 days ago by z.biranvand19830 • updated 4 days ago by James W. MacDonald41k
0
votes
1
answer
58
views
1
answer
count coverage for exact matches to sequence pattern
rsamtools genomicfeatures written 14 days ago by Vang Le70 • updated 14 days ago by Michael Lawrence8.8k
2
votes
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answer
97
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1
answer
2
votes
1
answer
77
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1
answer
3
votes
1
answer
74
views
1
answer
Error with ChIPpeakAnno Ensembl annotation
chippeakanno genomicfeatures written 9 weeks ago by b.nota260 • updated 9 weeks ago by Julie Zhu3.6k
3
votes
1
answer
98
views
1
answer
1
vote
1
answer
180
views
1
answer
0
votes
1
answer
92
views
1
answer
warning message from makeTxDbFromGFF in GenomicFeatures package
genomicfeatures written 9 weeks ago by Julie Zhu3.6k • updated 9 weeks ago by Johannes Rainer650
2
votes
1
answer
118
views
1
answer
How to extract only mRNA from TxDb object?
genomicfeatures written 10 weeks ago by alexandr.gopanenko20 • updated 10 weeks ago by Johannes Rainer650
2
votes
1
answer
137
views
1
answer
1
vote
1
answer
114
views
1
answer
problems with GenomicFeatures::supportedUCSCtables("hg38")
genomicfeatures written 3 months ago by Chao-Jen Wong20 • updated 3 months ago by Valerie Obenchain ♦♦ 5.8k
3
votes
1
answer
108
views
1
answer
How to extract transcripts from Txdb with length >100
rtracklayer genomicfeatures written 3 months ago by alexandr.gopanenko20 • updated 3 months ago by Martin Morgan ♦♦ 19k
2
votes
1
answer
156
views
1
answer
3
votes
2
answers
163
views
2
answers
Genomic features for genomic positions
genomicfeatures written 5 months ago by Asma rabe290 • updated 5 months ago by Vince Schulz60
1
vote
1
answer
134
views
1
answer
6
votes
1
answer
454
views
1
answer
makeTxDbFromUCSC fails to download refLink table
maketxdbfromucsc genomicfeatures refseq written 6 months ago by Sebastien Vigneau10 • updated 6 months ago by Hervé Pagès ♦♦ 11k
1
vote
1
answer
135
views
1
answer
2
votes
1
answer
342
views
1
answer
5
votes
2
answers
140
views
2
answers
2
votes
1
answer
229
views
1
answer
supportedUCSCtables(genome="hg38"): Is ensGene track really available?
genomicfeatures written 8 months ago by Chao-Jen Wong20 • updated 8 months ago by Hervé Pagès ♦♦ 11k
1
vote
1
answer
197
views
1
answer
mRNA start used instead of gene start in makeTxDbFromGFF
maketxdbfromgff genomicfeatures written 8 months ago by TimothéeFlutre70 • updated 8 months ago by Hervé Pagès ♦♦ 11k
4
votes
1
answer
130
views
1
answer
4
votes
1
answer
125
views
1
answer
Get internal exons using GenomicFeatures
granges genomicfeatures written 8 months ago by geparada8810 • updated 8 months ago by Michael Lawrence8.8k
0
votes
1
answer
146
views
1
answer
0
votes
2
answers
154
views
2
answers
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